KEGG   Methylocystis sp. SB2: LNB28_04970
Entry
LNB28_04970       CDS       T10237                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
mesz  Methylocystis sp. SB2
Pathway
mesz00010  Glycolysis / Gluconeogenesis
mesz00020  Citrate cycle (TCA cycle)
mesz00260  Glycine, serine and threonine metabolism
mesz00280  Valine, leucine and isoleucine degradation
mesz00310  Lysine degradation
mesz00380  Tryptophan metabolism
mesz00620  Pyruvate metabolism
mesz00630  Glyoxylate and dicarboxylate metabolism
mesz00640  Propanoate metabolism
mesz00670  One carbon pool by folate
mesz00785  Lipoic acid metabolism
mesz01100  Metabolic pathways
mesz01110  Biosynthesis of secondary metabolites
mesz01120  Microbial metabolism in diverse environments
mesz01200  Carbon metabolism
mesz01210  2-Oxocarboxylic acid metabolism
mesz01240  Biosynthesis of cofactors
Module
mesz_M00009  Citrate cycle (TCA cycle, Krebs cycle)
mesz_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
mesz_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:mesz00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    LNB28_04970 (lpdA)
   00020 Citrate cycle (TCA cycle)
    LNB28_04970 (lpdA)
   00620 Pyruvate metabolism
    LNB28_04970 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    LNB28_04970 (lpdA)
   00640 Propanoate metabolism
    LNB28_04970 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    LNB28_04970 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    LNB28_04970 (lpdA)
   00310 Lysine degradation
    LNB28_04970 (lpdA)
   00380 Tryptophan metabolism
    LNB28_04970 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    LNB28_04970 (lpdA)
   00670 One carbon pool by folate
    LNB28_04970 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mesz04147]
    LNB28_04970 (lpdA)
Enzymes [BR:mesz01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     LNB28_04970 (lpdA)
Exosome [BR:mesz04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   LNB28_04970 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox FAD_binding_2 FAD_oxidored NAD_binding_8 HI0933_like GIDA Pyr_redox_3 DAO Lys_Orn_oxgnase Thi4 FAD_binding_3 AlaDh_PNT_C 2-Hacid_dh_C
Other DBs
NCBI-ProteinID: ULO24752
LinkDB
Position
994755..996179
AA seq 474 aa
MTYDLVVIGSGPGGYVCAIRAAQLGLKTAVVEKDSTFGGTCLNVGCIPSKALLHASHMFE
EAAHGLAPLGVIVDPPRLDLAAMMKHKDDTVGANVNGVAFLFRKHKIESFRGVGRLKGAG
RVEVTSADGAVQTLETKNIVLATGSAVAPLRDASGAEIAIDEKLILSSTGALALAKTPKR
LVVVGAGVIGLELGSVWRRLGAEVIAIEYLDRILPGFDLEIAARFQKILEKQGFDFRLAS
KVTGVRREGTGKAERAVVSYSSVDGASSDTIEADAVLIATGRIPFTQGLGLEDAGVALER
GRIVIDEHFATNVPEVYAIGDVVRGPMLAHKAEDEGIAIAEILAGQAGHVNYGVIPSVVY
TMPEVAAVGITEEEAKSGGIEVAIGKFPFTANGRARAMRATDGFVKIIADAATDRVLGVH
IVGAAAGELIAEAAVLMEFSGSSEDLARTCHAHPTLSEAIREAAFAVAKRAIHI
NT seq 1425 nt   +upstreamnt  +downstreamnt
atgacctacgatcttgtcgtgatcggatccggtccaggcggttacgtatgcgcgatccgc
gcggcgcaacttggattgaagacggccgtcgtcgagaaggattcgacgttcggcggcaca
tgcctcaatgtcggctgcattccgtcgaaggcgctgctccacgcttcacatatgttcgaa
gaagcggcgcatggtctggcgccgctcggcgtcatcgtcgatccgccgcgtctcgatctt
gcggcgatgatgaagcacaaggacgacaccgtcggcgcgaacgtcaacggcgtcgccttc
ctgtttcgaaagcacaagatcgagtcgtttcgcggcgtcggccgcctgaaaggcgccggg
cgagtcgaggtcacgagcgcggacggcgcggttcagacgctggaaacgaagaacattgtt
ctcgccaccggctcagccgtcgcaccgctgcgcgacgcctccggcgcggagatcgcgatc
gacgagaagctgatcctttcgtcgaccggcgctttggccttggcgaagacgccgaagcgg
ctggtcgtcgtcggcgcaggcgtcatcggactcgagcttggatcggtctggcggcggctt
ggcgccgaagtgattgcgatcgaatatctcgatcgcatcctgcccggcttcgatctcgag
atcgccgcacgcttccagaagatcctcgaaaaacagggcttcgatttccgcctcgcctcc
aaggtgacaggcgtgcggcgcgagggaaccggcaaggccgagcgcgctgtcgtctcctat
tcgtcggtcgatggcgcgtcatccgacacgatcgaggccgacgccgtgctcatcgcgacg
ggccgcatcccgttcacgcagggcctcggactcgaggacgccggcgtcgccctggagcgc
ggacgaatcgtcatcgacgaacatttcgcgactaatgttccggaagtctacgccatcggc
gacgtggtgcgcgggccgatgctcgcccacaaggctgaggacgaaggcatcgccatcgcc
gaaatcctcgccggacaggccgggcatgtgaattacggcgtcattcccagcgtcgtctac
acgatgccggaagtcgcagcggtcggcatcaccgaggaagaggccaaatccggagggatc
gaggtcgcgatcggcaaattcccctttaccgccaatggccgcgcgcgcgcgatgcgcgcg
accgacggtttcgtgaagatcatcgccgacgcggcgaccgaccgggtgctgggcgtccat
atcgttggcgcggcggccggcgaattgatcgctgaagctgccgtgttgatggaattttcc
ggctcgtcggaagatctcgcgcgcacctgccatgcccatccgacgctctcggaggcgatt
cgcgaggcggccttcgccgtcgccaaacgcgccatccacatttga

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