Methylocystis sp. SB2: LNB28_05020
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Entry
LNB28_05020 CDS
T10237
Symbol
kdsA
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
mesz Methylocystis sp. SB2
Pathway
mesz00541
Biosynthesis of various nucleotide sugars
mesz01100
Metabolic pathways
mesz01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
mesz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
LNB28_05020 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
mesz01005
]
LNB28_05020 (kdsA)
Enzymes [BR:
mesz01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
LNB28_05020 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
mesz01005
]
Lipid A
LNB28_05020 (kdsA)
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GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
ULO25470
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Position
1004185..1005015
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AA seq
276 aa
AA seq
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MLIGHGARRVEIGDDLPLTLIAGPCALESRDLALKLASELAAIGERLKIGVVFKASFDKA
NRTSGGAARGVGLDAALPIFAEVREKTGLPVTTDVHEAWQCARVAEVVDLLQIPAFLCRQ
TDLIVAAAKTGRPVNIKKGQFLAPWDMVHAVEKAREAGAGGVLVTERGTSFGYNALVADM
RALPILKETTGAPVVFDATHAVQQPGGQGTSSGGERRFVATLARAAVAVGVAALFIETHP
DPGAAISDPATQVPLGELETMVKELMAFDRLAKAIR
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgctcattggacatggcgcgcggcgcgtcgagatcggcgacgacctgcctttgacgctg
atcgccggcccctgcgcgctggagagccgcgatctggcgctcaaactcgccagtgaactc
gccgcgatcggcgagcgactgaagatcggcgtcgtcttcaaggcgtccttcgacaaggcg
aaccgcaccagcggcggagcggcgcggggcgtcggcctcgacgcggcgctgccgatcttt
gctgaagtcagagagaagaccggcttgcccgtgacgaccgacgtgcatgaagcatggcaa
tgcgcgcgcgtcgccgaggtcgtcgacctgctgcagattcccgccttcctctgccgtcag
accgacctcatcgtcgccgcggcgaaaaccggacgccccgtcaatatcaagaagggacag
ttcctcgcgccctgggacatggtccacgccgtcgagaaggcgcgtgaggccggcgccggc
ggcgtcctcgtcaccgaacgcggaacgagcttcggctataatgcgctggtcgcggacatg
cgcgccctgccgatcctgaaggagaccaccggcgcgcccgtcgtcttcgacgcgacgcat
gccgtgcagcagccgggcggacaagggacatcgtcgggcggcgagcggcgcttcgtcgca
acgctcgcccgcgccgccgtggcggttggcgtcgcggcgcttttcatcgaaacgcatccc
gatccgggcgctgcgatctcggaccccgcgacgcaagtcccgctcggcgagctcgaaaca
atggtcaaggagctgatggcgttcgaccgtctggcgaaggcgatccgctaa
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