Methylocystis sp. SB2: LNB28_05325
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Entry
LNB28_05325 CDS
T10237
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
mesz Methylocystis sp. SB2
Brite
KEGG Orthology (KO) [BR:
mesz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mesz03021
]
LNB28_05325 (rpoH)
Transcription machinery [BR:
mesz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LNB28_05325 (rpoH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r1_2
HTH_19
HTH_3
HTH_11
Sigma70_r3
KORA
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
ULO24817
LinkDB
All DBs
Position
complement(1062536..1063423)
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AA seq
295 aa
AA seq
DB search
MANALPIVSEDGLARYLSEIRRFPMLEPQQEYMLAKRWREHEDAKAAQELITSHLRLVAK
IAMGYRGYGLPIGEIVSEGNVGLMQAVKRFEPERGFRLATYAMWWIRASIQEYILRSWSL
VKMGTTASQKKLFFNLRKAKSRISAFEEGDLKPENVEKIAHRLGVSKQDVIDMNRRMGGD
SSLNTPLREEGEGEWQDWLVDDSVDQEHLLVAHEESDNRLKALRGALDVLNPRERRIFEA
RRLSDDPVTLETLSEEFGVSRERVRQIEVRAFEKVQAAVRDGVARIEAAPAPAAP
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatgccttgccaatcgtctcagaagacggcctagcccgctatctttctgaaatc
aggcggtttccaatgttggagccgcagcaggaatatatgcttgccaagcgctggcgcgag
catgaagacgcaaaagccgcgcaggaattgatcacgtcgcatctgcggctcgtggcgaaa
atcgccatgggctatcgcggctacggcttgccgatcggggaaatcgtttccgaaggcaat
gtcggcctcatgcaggccgtcaagcgcttcgagcccgagcgcggcttccgccttgcgacc
tacgcaatgtggtggatccgcgcctccatccaagagtatattttgcgctcctggtcgctc
gtcaaaatgggcaccaccgcgagtcagaagaagctcttcttcaatcttcgcaaggccaag
agccgcatctcggccttcgaggaaggcgacctgaagcccgagaacgtcgaaaagatcgcg
catcggcttggcgtgtccaagcaggacgtcatcgacatgaatcgccgcatgggcggcgac
tcgtcgctcaacacgccgttgcgcgaggagggcgaaggcgaatggcaggactggctggtc
gacgatagcgtcgatcaggagcatctgctcgtcgcccacgaagaaagcgacaatcgcctg
aaggcgctgcgcggcgcgcttgacgtgctcaatccgcgcgagcggcgcatcttcgaggcg
cgccgactgtccgacgatcctgtcacgctcgaaacgctctccgaggaattcggcgtgtcg
cgtgagcgcgtgcgccagatcgaggtgcgcgccttcgagaaggtgcaggcggcggtgcgc
gacggcgtcgcgcggatcgaagcggcgcccgcgccggcggcgccgtag
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