Methylocystis sp. SB2: LNB28_07530
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Entry
LNB28_07530 CDS
T10237
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
mesz Methylocystis sp. SB2
Brite
Enzymes [BR:
mesz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LNB28_07530 (addB)
DNA repair and recombination proteins [BR:
mesz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
LNB28_07530 (addB)
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Ortholog
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GFIT
Other DBs
NCBI-ProteinID:
ULO25223
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Position
complement(1542381..1544669)
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AA seq
762 aa
AA seq
DB search
MLAHRRNLFTIAPGAPFLKTFVSALLDGEIISGLTRDTPPLTMARATIYVPTQRAARALA
AEFAQALDRRATLLPRILPLGALEERENAALLAGDFDVEADASLAAPIEELERRLLLSQL
ILQWAQAIGRALISVDTSGAPSLHESEPLLVASTPSAAYALAAELGALIDELHIEDVSVD
AFDTLSDDAYSDFWAITTKFLQIALREWPQILADRRRIDASAYQKRLIEAQIAELARTPP
TAPVIALGSTGAQPTTARLLAAIAGLENGAVILPGLDQIMSAEAWASVGQTERGGEPAFT
HPQMMLKRLLAAMGAARDEPRELARVTPALAARRAFVSQAMAPADATSAWRDYQAAQSGG
FAEALGGVIALEASDERLEALALALFMREALETPGRTAALVTPDRLIARRVAAELRRFDI
EIDDSGGMPLARTPIGALARLVAEIGSDRAGAVNVAALLAHPLTALGLSRAHVASLASPI
EIGVQRTFAQPDGGWAARVPPARELARAPHAHPAARRISDEDWRAIEDALTRIDAAFASF
AALTPTASLSDRARAHSGALEAVIAGADDAVEEGASTLYELLDRLAHAEAPAGFDAQNYT
ALFDRVAAETMLRGPRRAHQRLKILGPLEARLIEADLVLLAGLDEGVWPPQTDTGAFLNR
SMRAQLGLMAPERRIGQSAHDFIMALGAERVVLSRAIKRNGAPTVPSRFIARLSALAGDA
FDACRKRGDAMLAIAAALDRPKATIAIERPQPRPPRRCAHNA
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgctcgctcatcggcgcaatctgttcaccattgcgcctggcgcgccgtttctgaagacg
tttgtttcggcgctgctcgacggagagatcatttccggcctcacgcgcgacacgccgccg
ctgacgatggcgcgcgcaacgatctatgtgccgacccagcgcgcggcgcgggcgctcgcg
gccgaattcgcgcaagcgctggatcggcgcgcgacgctgctgccgcgaattctgccgctc
ggcgctttggaggagcgcgagaacgccgctctgctcgccggagattttgacgtcgaggct
gatgcgtcgctcgccgcgccgatcgaagagctggaacgacgtctgctgctgtcgcagctc
attctgcaatgggcgcaagcgatcgggcgcgcgctcatctcggtcgatacaagcggcgcg
cccagcctgcatgagagcgaaccgcttctcgtcgcatcgacgccgtcggccgcctatgcg
ctggccgccgagcttggcgccctcatcgacgaattgcacatcgaagacgtttcggtcgac
gccttcgatactttgagcgatgacgcctacagcgacttctgggcgatcacgacgaagttt
ctgcagatcgccttgcgcgaatggccgcaaattctcgccgaccggagacggatcgacgcc
agcgcttaccagaaacgcctgattgaggcgcagatcgcggaactcgcccgcacgccgccg
accgcgccggtgatcgcgctcggctcgaccggcgcgcagccgacgaccgcgcggctgctc
gccgccatcgccgggctcgaaaacggcgccgtgatcctaccgggcctcgatcagatcatg
agcgcggaggcctgggcgagcgtgggtcagaccgagagaggcggagaaccggccttcacc
catccgcagatgatgctgaaacgcttgctcgccgccatgggcgcggctcgcgacgagccc
cgggaacttgcgcgcgtgactccggcgctggcggcgcgccgcgcgtttgtctcgcaagcg
atggcgcctgccgacgcgacgtcggcatggcgcgactatcaggctgcgcagagcggcggc
ttcgcagaggcgctcggcggcgtcatcgccttggaagcgtccgacgagcggttagaggct
ttggcgcttgcgctcttcatgcgcgaggcgctggagacgcccggccgaacggcggcgctt
gtgacgccggaccggctcattgcgcggcgcgtcgccgccgagttacgacgcttcgacatt
gagatcgatgattcgggcggcatgccgctcgcaagaacgcccatcggcgcgctggcgcga
ctcgtcgccgagatcggatcggatcgcgcgggcgccgtgaacgtcgcggcgctgctcgcc
catccgctgaccgcgctcggactttcgcgcgcgcatgtcgcatcgctcgcgtcgccaatc
gagattggcgtgcagcggacattcgcgcagcctgacggcggctgggcggcgcgtgtgccg
ccggcacgcgaattggcgcgcgcgccgcatgcgcatccggcggcgcgccgcatcagcgat
gaggattggcgggcgatcgaagacgcgctcacgcgtattgacgccgctttcgcgtccttc
gccgcgctgacgccgacggcgtcgctgtcggaccgcgcgcgcgcgcatagcggcgcgctt
gaagcggtgatcgccggcgccgacgacgctgttgaagaaggcgcgtcgacgctgtacgaa
cttctcgaccggctcgcgcacgctgaggcgccggcaggctttgacgcgcaaaactacact
gcgctcttcgaccgcgtcgccgccgagacgatgctgcgcggcccgcgacgcgcccatcag
cgcttgaagatcctcggccctttggaggcgcggcttatcgaggccgacctcgtcctgctc
gccggactggacgaaggcgtatggccgccgcagacggacaccggcgcctttctcaaccgc
tcgatgcgcgcccaactcggcctgatggcgccggagcgacgcatcggccaaagcgcacat
gacttcatcatggcgttgggcgcagagcgcgtcgtgctcagccgcgcgatcaagcgcaat
ggcgcgccaaccgttccttcccgcttcatcgcgcgtctctcggcgcttgccggcgacgca
ttcgacgcctgcaggaaacgcggcgacgcgatgctcgcgatcgccgcagcgctcgatcgt
ccaaaagcgacgattgcgatcgaacggccgcagccgcgccccccgcggcgctgcgcccac
aacgcttga
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