Methylocystis sp. SB2: LNB28_09790
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Entry
LNB28_09790 CDS
T10237
Name
(GenBank) helicase
KO
K17675
ATP-dependent RNA helicase SUPV3L1/SUV3 [EC:
5.6.2.6
]
Organism
mesz Methylocystis sp. SB2
Brite
KEGG Orthology (KO) [BR:
mesz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
mesz03029
]
LNB28_09790
Enzymes [BR:
mesz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
LNB28_09790
Mitochondrial biogenesis [BR:
mesz03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
LNB28_09790
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEXQc_Suv3
Helicase_C
DEAD
DUF934
Motif
Other DBs
NCBI-ProteinID:
ULO22488
LinkDB
All DBs
Position
complement(1986330..1989497)
Genome browser
AA seq
1055 aa
AA seq
DB search
MTVAPSYPTSRAAPRARPFDRGVAAVLGPTNTGKTHHAIERMLSFPSGVIGLPLRLLARE
VYNRVAERVGVDNVALITGEEKIKPRAPAYWVATVEAMPRDVQADFVAIDEIQLAADLDR
GHIFTDRLLHWRGRQETLLIGAATMAPLVTELFPGAPIFTRPRLSKLSFAGDKKISRLPP
RTAIVAFSAEEVYAIAELIKRQRGGAAVVLGVLSPRTRNAQIELYQGGDVDYIVATDAIG
MGLNLDVDHVAFASDRKFDGIRHRRLTPAEFGQIAGRAGRHMSDGFFGATGRCPPFDEEL
IEALEDHRFDPVKTLQWRTSSLDFSSIDALMHSLDQVPAHPDLVRARVADDQRALEAASR
DEIARRNAKTTADVARLWEACQIPDYRKTSPAAHAELALAIFAFIARRGKIPEDWMARQI
EAVDRIDGDIATLSNRLAQVRTASFIANRSGWLDDSQHWQSVARRVEDSISDALHDRLTQ
RFVDRRTSVLARRLRENAMLEAEINAAGDVLVEGQHVGSLQGFRFTPDPGAAGEAAKTLN
AAAQKALAGEFEARATRVFDAVDDAFALGNDGLIRWLGEPVGKIASGAGVLAPTTRVLAD
EQLTGPALEKVKQRLDLWLAQHVKKLLGPLEQLEKGEGLEGVTRGVAFQLAEELGVLDRA
RVAKDVKAFSQEDRAALRKLGVRFGAYHIYLPALLKPAPRALSALLWALHHGGLENVRGL
EEVPHLAASGRTSFAADASIPKGFYRAAGFRVCGERVVRVDILERLADLIRPAIAYRPGL
TAGEPPPGAADADGFVVTVAMTSLTGCSGEAFSSILKSLGYASTQRPGPAITVAIVPAAA
MEPVTPKTAAKPAEAASEDIQAESAAAEAPAAAEAEIALASQPAASEDAQVETPAAVEEP
ATEAPASVAVEESAEAHEEEATAAEAREEPASEAAPPKAAPTEPESIEIWRPQRHVHAAP
RPREAGAHRQAPGPGAEDNKQQRPPRRDQRPGNAPGKEGRPAGKPRFEGRPPRDDARARR
PAGFAAPERRERQPDPDPPFAKLAALKAELEKKGK
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atgacagtcgcgccgtcttacccgacgagccgcgccgccccccgcgcaaggccgttcgac
aggggcgtggcggcggtgctcggccccaccaacaccggcaagacgcatcacgccatcgag
cgtatgctgtcctttccctccggcgtcattgggttgccgctgcgcctgctcgcgcgtgag
gtctataatcgcgtcgccgaacgcgtcggcgtggacaatgtcgcgctcatcaccggcgag
gaaaaaattaagccccgcgcgccggcctattgggtcgcgacggttgaagcgatgccgcgc
gacgtccaggcggatttcgtcgcgatcgacgaaatccagctcgccgccgatctcgaccgc
ggccacattttcaccgaccggctgctccactggcgcggacgccaggagactctcctgatc
ggcgcggccacgatggcgccgctcgttacggagctctttcccggcgcgccgatctttacg
cgcccgaggctttcaaaactttctttcgccggcgacaagaaaatctcgaggctgccgccg
cgcaccgccatcgtcgccttttcagccgaagaggtttacgcgatcgcggaactgatcaag
cgccagcgcggcggggcggccgtcgtgctcggcgtgctgtcgccgcgcacgcgcaacgcg
cagatcgagctctatcagggcggagacgtcgattacatcgtcgcgacggacgccatcggc
atgggcctcaatctcgacgtcgatcatgtcgctttcgcctccgatcgcaagttcgacgga
atacgccatcgcaggctgacgccagcggaatttggacagatcgccggcagagcggggcgc
catatgagcgacggattttttggcgcgaccggccgctgcccgcccttcgacgaggagttg
atcgaggctttggaggaccaccgcttcgatccggtgaagacgctgcaatggcgcaccagc
tccctcgatttttcttcgatcgacgcgctgatgcattctctcgaccaggtcccggcgcat
ccggatctagtgcgcgcccgggtcgcagacgatcaaagggcgcttgaagcggcgagccgt
gatgaaatcgcgcggcgcaacgccaagacgacagccgatgtcgcgcgactctgggaagcc
tgccaaatccccgactaccgcaagacttcacctgccgctcacgccgagctcgcgctggcg
atattcgccttcatcgcccggcgtggcaagatccccgaggactggatggcgcggcagatc
gaagcggtcgaccgcatcgacggcgacatcgcgacgctgtcgaaccgcctcgcgcaagtg
cgtaccgcaagttttatcgccaaccgttccggctggcttgacgactctcagcattggcag
agcgtcgcgcgtcgggtagaggacagcatatccgacgcgttgcacgacagactgacgcag
cgtttcgtcgaccgccgcaccagcgtgctggcgcgccgcttaagagagaatgcgatgctt
gaagccgaaatcaacgccgccggcgacgttctggtcgagggccagcatgtcggaagcctc
cagggatttcgcttcacgccggatcccggcgcggcgggcgaagcggccaagacgttgaac
gcggcggcgcagaaggcgcttgctggagaattcgaggctcgggcgactcgcgtgttcgac
gcggtcgacgacgccttcgcgctcggcaatgacggcctgattcgctggctcggcgaaccc
gtggggaaaatcgcctctggcgccggcgtgctggcgccgacgacgcgcgtgcttgccgac
gagcagctgacaggaccggctctggagaaggtcaagcagcgcctcgacctctggctcgcg
caacatgtcaagaagctgctggggccgctcgagcagctggagaagggcgaaggcttggaa
ggggtgacgcgcggcgtcgccttccagctcgccgaagaattgggcgtgctggaccgcgcg
cgcgtcgccaaggatgtgaaggctttctcccaggaggaccgggccgcgctgcgcaagctc
ggcgtgcggttcggcgcctatcacatctatctgcccgcgcttctgaagcctgcgccgcgc
gcgctttcggcgctgctttgggccttgcatcacggcggtctcgaaaacgtgaggggtctt
gaggaagtgccgcatctggcggcctcgggacgcacatccttcgccgccgacgcttcgatc
cccaaaggcttttatcgcgccgccggcttccgagtctgcggcgagcgcgtcgttcgcgtc
gacattctcgaacgtctcgccgatctcattcggccggcgatcgcctaccgtccggggctc
accgcgggtgagccgccgcccggcgcggccgacgccgacggcttcgtcgtcaccgtcgcg
atgacctcgctcacgggctgttccggcgaggctttttcctcgatcctgaagtcgctcggc
tatgcttcgacgcagcgtccagggcctgcgattacggttgcgatcgtgccggcggcggcg
atggagccggtgacgccaaagaccgcggccaagccagcggaagccgcgagcgaagatatt
caggccgaaagcgccgccgccgaggcgcccgccgccgcggaagcggagatcgctctcgcg
tcgcagccggccgcctcggaggacgcgcaggtcgagacgcctgccgccgtggaagagccg
gcgacagaggctccggcgtccgtcgccgtggaggaaagcgccgaagcgcacgaagaagag
gcgacagcggccgaagcgcgggaagagcctgcctcggaggctgcgccccccaaagccgcg
ccgaccgagccggaatccatcgaaatctggcgtccgcagcgccacgttcatgccgctccg
cgcccccgcgaggccggcgcgcatcggcaggcccccggtccgggcgctgaggacaacaag
cagcagcggccgccgcgccgcgaccagcggcccggcaacgctccgggcaaggaggggcgt
ccggccggaaagccgcgcttcgagggccgcccgccgcgcgatgacgcccgcgcccggcgc
ccggcaggcttcgccgcgccggagcggcgcgagcgccagcccgatccggatccgcccttc
gccaagcttgcggctctcaaggccgagctcgagaagaagggcaaatag
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