KEGG   Methylocystis sp. SB2: LNB28_10895
Entry
LNB28_10895       CDS       T10237                                 
Name
(GenBank) PIN domain-containing protein
  KO
K18828  tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
Organism
mesz  Methylocystis sp. SB2
Brite
KEGG Orthology (KO) [BR:mesz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:mesz03016]
    LNB28_10895
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:mesz02048]
    LNB28_10895
Transfer RNA biogenesis [BR:mesz03016]
 Prokaryotic type
  tRNA degradation factors
   LNB28_10895
Prokaryotic defense system [BR:mesz02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   VapC-VapB
    LNB28_10895
SSDB
Motif
Pfam: PIN DUF6400
Other DBs
NCBI-ProteinID: ULO22690
LinkDB
Position
complement(2203175..2203564)
AA seq 129 aa
MARYLLDTNIVIAAALGLPGVLDRLSALDIGEVAVSAISLAETLGAAASENNGRLTENIA
LLAENLDVLPFDRGAADAYGALLRKLDPKRRRMLDRMIAAQALDLGLTLIAANTEDFDDI
AGLTVEKWA
NT seq 390 nt   +upstreamnt  +downstreamnt
atggcgcgctacctcctcgacaccaatatcgtcatcgccgcggcgctcggccttcccggc
gtgctcgatcggctctccgcgctcgacatcggcgaagtggcggtctcggcgatcagtctc
gccgaaacgctcggcgcagccgcatccgaaaataacggacggctcacggagaacatcgcg
ctactcgccgaaaatctggacgtgctgccctttgaccgcggcgccgccgacgcctatggc
gcgctgctgcgcaagctcgatccgaaacgccgccgcatgctcgatcgaatgatcgccgcg
caggcgctcgatctcggcctcacgctgatcgcggcgaacactgaggatttcgacgacatc
gccggccttacggtcgagaaatgggcgtga

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