Methylocystis sp. SB2: LNB28_12745
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Entry
LNB28_12745 CDS
T10237
Symbol
sucD
Name
(GenBank) succinate--CoA ligase subunit alpha
KO
K08692
malate-CoA ligase subunit alpha [EC:
6.2.1.9
]
Organism
mesz Methylocystis sp. SB2
Pathway
mesz00630
Glyoxylate and dicarboxylate metabolism
mesz00680
Methane metabolism
mesz01100
Metabolic pathways
mesz01120
Microbial metabolism in diverse environments
mesz01200
Carbon metabolism
Module
mesz_M00346
Formaldehyde assimilation, serine pathway
Brite
KEGG Orthology (KO) [BR:
mesz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
LNB28_12745 (sucD)
09102 Energy metabolism
00680 Methane metabolism
LNB28_12745 (sucD)
Enzymes [BR:
mesz01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.9 malate---CoA ligase
LNB28_12745 (sucD)
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GFIT
Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
DapB_N
Motif
Other DBs
NCBI-ProteinID:
ULO23021
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All DBs
Position
2577265..2578152
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AA seq
295 aa
AA seq
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MSILIDEKTPILVQGITGDKGSFHTKEMVDYGSNVVAGVTPGKGGKTHHGVPVFNTVREA
VRETGAQASITFVAPAFCADAIMEAADAGVRLICSITDGIPAQDMMRVKRYFLRFPKDRR
PMLVGPNCAGIISPGKAMLGIMPGHIYKQGAVGLISRSGTLGYEAASQLKALGIGISTSV
GIGGDPINGSSFLDHLVLFDKDPETQAVLIIGEIGGPQEAEASAWIKENFSKPVIGFVAG
LTAPKGRRMGHAGAIISATGDSAAEKTEIMKSYGLTVAPSPAEFGSTVAKVLRSA
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgagcattctcattgacgaaaagacgccgatcctggtccagggcatcaccggcgacaag
ggcagtttccacaccaaggagatggtcgactacggcagcaatgtcgtcgccggcgtcacg
cccggaaagggcggcaagactcaccacggcgtgccggtgttcaacaccgtccgcgaagcg
gtgcgcgaaaccggcgcgcaggcgtcgatcaccttcgtcgcgccggccttttgcgccgac
gcgatcatggaggccgccgacgccggcgtccgcctgatctgctcgatcaccgacggcatt
ccggctcaggacatgatgcgcgtgaagcgctacttcctgcgctttcccaaagatcgccgg
ccgatgctggtcggcccgaattgcgccggcatcatttcgcccggcaaggcgatgctcggc
atcatgccgggccatatctacaagcagggcgcggtgggactgatctcgcgctccggcacg
ctcggctatgaagcggcgtcgcagttgaaggcgcttggcatcggcatatcgacctcggtc
ggcatcggcggcgatccgatcaacggttcgtcgttcctcgaccatctggtgctgttcgac
aaagatcccgagacccaggccgtgctcatcatcggcgaaatcggcggtccgcaggaggcc
gaagcctccgcctggatcaaggagaatttctccaagccggtgatcggctttgtcgccggc
ctcacggcgcccaagggccgccgcatgggccatgccggcgccatcatttcggcgacgggc
gacagcgctgcggaaaaaaccgagatcatgaagtcttacgggctcacggtcgcgccgagc
ccggcggaattcggatcgactgtcgccaaggtattgcggagcgcctga
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