Methylocystis sp. SB2: LNB28_12875
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Entry
LNB28_12875 CDS
T10237
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
mesz Methylocystis sp. SB2
Pathway
mesz00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
mesz00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
LNB28_12875 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
mesz01007
]
LNB28_12875 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mesz03016
]
LNB28_12875 (aspS)
03029 Mitochondrial biogenesis [BR:
mesz03029
]
LNB28_12875 (aspS)
Enzymes [BR:
mesz01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
LNB28_12875 (aspS)
Amino acid related enzymes [BR:
mesz01007
]
Aminoacyl-tRNA synthetase
Class II (A)
LNB28_12875 (aspS)
Transfer RNA biogenesis [BR:
mesz03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
LNB28_12875 (aspS)
Prokaryotic type
Other AARSs
LNB28_12875 (aspS)
Mitochondrial biogenesis [BR:
mesz03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
LNB28_12875 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
GAD
Motif
Other DBs
NCBI-ProteinID:
ULO23046
LinkDB
All DBs
Position
complement(2602625..2604406)
Genome browser
AA seq
593 aa
AA seq
DB search
MHRYRSHNCGEPNEALVGQKIRLSGWCHRIRDHGGVLFIDLRDHYGLTQCVVDPDPPAFA
QAEKLRSEWVVRLDGEVRKRPAGTENPDMPTGQVEVYVNEIEVLGAAAELPVPVFGDQPY
PEDTRLKYRFIDLRREKLHQNIMLRGRIIDSIRMRMKQAGFFEFQTPILTASSPEGARDF
LVPSRLHPGKFYALPQAPQQFKQLIMVAGFDRYFQIAPCFRDEDARADRSPGEFYQLDVE
MSFVTQEDVFGAIEPVLRGLFEEFANGKAVTQKFPRISFRESMLKYGTDKPDLRNPLLIA
DVSEEFAREDVSFKAFKGKTVRAIPAPGAAAQPRSFFDKLNDWARSEGAPGLGYVIFEEE
GGALAGKGPIAKFIPAEAQAAIAAKAGVKAGDAVFFSAGEETAAARLAGMARIRIGDELG
VSKKDVFEFCWIVDFPMYEWNEDEKKVDFSHNPFSMPQGGMEALEGQDPLTILAYQYDIV
CNGVELSSGAIRNHRPDVMKKAFEIAGYGEDVLIEKFGGMYRAFQYGAPPHGGIAPGVDR
IVMLLAEEENLREVTLFPMNQRAEDLLMGAPSEVTMKHLRELHIRLNLPETKA
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgcatcgctaccgttcgcataattgtggagaaccaaacgaggcgctcgtcggccagaaa
atccgtctctccggctggtgccatcgcatccgcgatcatggcggcgtgctgttcatcgac
ctgcgcgaccattacggcctgacgcaatgcgtcgtcgatcccgatccgcccgccttcgcg
caggcggagaaattgcgctccgaatgggtggtgcggctcgacggcgaggtgcgcaagcgc
cccgccggcaccgaaaatcccgacatgccgacaggacaggtcgaggtttacgtcaacgag
atcgaggtgttgggcgccgccgccgaattgccggtgccggtcttcggcgaccagccctat
cccgaggacacgcggctcaaatatcgcttcatcgatcttcggcgcgagaagctgcaccag
aacatcatgctgcgcggccggatcatcgactcgatccgcatgcgcatgaagcaggcgggc
ttcttcgagttccagacgccgattctgaccgcgtcctcgcccgagggcgcgcgcgacttt
ctcgtgccctcgcgcctgcatccggggaaattctacgcgctgccgcaggcgccccagcaa
ttcaagcagctcatcatggtcgcgggcttcgatcgctatttccagatcgcgccctgcttt
cgcgacgaggacgcgcgcgccgaccgttcgccgggagagttctaccagctcgacgtcgag
atgagctttgtgacgcaggaagacgtgttcggcgcgatcgagccggtgctgcgcggactc
ttcgaggagttcgcgaacggcaaggcggtcacgcagaaattcccgcgcatttccttccgc
gagtcgatgctcaaatatggcaccgacaagccggatctgcgcaacccgctgctcatcgcc
gacgtgtcggaggaattcgcccgcgaagacgtgagcttcaaggcgttcaaaggcaagacc
gtgcgcgccatacccgcgccgggggccgccgcgcagccgcgcagctttttcgacaaattg
aacgattgggcgcgtagcgaaggcgcgccgggcctcggctatgtgatctttgaggaagaa
ggcggcgcgctcgccggcaagggcccgatcgcgaaattcattcccgcggaggcgcaggcc
gcaatcgccgccaaggcgggcgtcaaggcgggcgatgcggtgttcttctccgccggcgaa
gagaccgccgccgcaaggctcgccggcatggcgcgcatccgcatcggcgacgaactcggc
gtatcgaagaaagatgtcttcgaattctgctggatcgtcgacttcccgatgtacgagtgg
aacgaggacgagaagaaggtcgacttctcgcacaatcccttctcgatgccgcaggggggc
atggaggcattggaaggtcaggacccgctcaccatcctcgcctaccaatatgacatcgtc
tgcaacggcgtcgaattatcgtccggcgcgatccggaaccatcgtcccgacgtcatgaag
aaagccttcgagatcgccggctatggcgaagacgtgctgatcgagaaattcggcggcatg
tatcgcgccttccaatatggcgcgccgccgcatggcggcattgcgccgggcgtcgatcgc
atcgtgatgctgctcgccgaagaggaaaacttacgcgaagtgacgctattcccgatgaat
cagcgcgccgaggatttgctgatgggcgcgccgtcggaagtgacgatgaagcatctgcgc
gaactgcacatccggctgaatctgccggagaccaaggcgtag
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