Methylocystis sp. SB2: LNB28_16875
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Entry
LNB28_16875 CDS
T10237
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mesz Methylocystis sp. SB2
Pathway
mesz03420
Nucleotide excision repair
mesz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mesz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LNB28_16875
03430 Mismatch repair
LNB28_16875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mesz03400
]
LNB28_16875
Enzymes [BR:
mesz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LNB28_16875
DNA repair and recombination proteins [BR:
mesz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LNB28_16875
MMR (mismatch excision repair)
Other MMR factors
LNB28_16875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
AAA_12
Motif
Other DBs
NCBI-ProteinID:
ULO23769
LinkDB
All DBs
Position
complement(3463882..3465951)
Genome browser
AA seq
689 aa
AA seq
DB search
MSGAHLEKLNDWQRSAVEHGVGLADGKMGGPLLIIAGAGSGKTNTLAHRVAHLIVNGADP
RRILLMTFSRRAASEMGRRVERICAKVLGNKAGALTDALAWAGTFHGIGARLLRDYAEQI
GLDPQFTIHDREDSADLMNLIRHQLGFSKMESRFPTKGTCLVIYSRAVNAEAPLPDVLRA
NYPWCARWEEQLRELFAGYVEAKQVQNVLDYDDLLLYWAQTVSDPILAHDIGGRWDHVLV
DEYQDTNRLQASILMALKPGGRGLTVVGDDAQSIYSFRAATVRNILDFPTEFSPPAEIIT
LDRNYRSTQPILAAANGVINLAKERFTKNLWTDRESAERPRLVTVRDEADQARFVAEEVL
ENREGGMRLKEQAVLFRASHHSGPLEVELTRRNIPFIKFGGLKFLDSAHVKDMLAALRFA
QNPRDRVAGFRVMQLLPGVGPSWAQTVLDAMADRPDPISIIGDLPCPPRAAADWPGFVAL
LRQLGGRSAGWPAEIAQVRDWYEPHLDRMHEHADMRKADLLQLEDIAAGYPSRERFLTEL
TLDPPDATSGQAGIPLLDEDYLILSTIHSAKGQEWKSVFLLNTVDGCIPSDLGAGTSAEI
EEERRLLYVAMTRAKDSLSLILPQRFFTHGQSATGDRHVYASRTRFIPPNLLQHFESRAW
PIVPTGQATGQEAPRVRVDVSARMRGMWR
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgagcggggcgcatctggaaaagttgaacgactggcagcgcagcgcggtcgagcatggc
gtcggtcttgccgatggcaaaatgggcggcccgctgctgatcattgccggcgctggatcg
ggcaagaccaacacgctggcgcatcgggtcgcgcatttgatcgtcaacggcgccgatcca
cggcgcatcctgctgatgactttttcgcgtcgagccgcatccgagatgggacgccgggtc
gagcgcatctgcgcgaaggtgctgggcaataaggccggcgcgctcaccgacgcgctcgct
tgggccggcacgttccacggcatcggcgcgcggctgctgcgcgactatgccgagcagatc
ggtctcgatccgcaattcaccatccacgatcgcgaagacagtgccgacctgatgaatctg
atccggcaccagctcggcttctctaagatggagagccggtttccgaccaaagggacctgt
cttgtgatctattcgcgagcggtgaatgccgaagcgccgctgccggatgtgcttcgcgcc
aactatccatggtgtgcgcgatgggaagaacagttgcgtgagctgttcgcgggctacgtc
gaagccaagcaggtccagaacgttctcgattatgacgacctgctgctctattgggcgcag
acggtcagtgatcccatcctcgcccacgatatcggcggacgctgggatcatgttctggtc
gacgaatatcaggacaccaaccggcttcaggcctctatcctgatggcgttgaagcccggc
ggtcgcggtttgacagtcgtcggcgacgacgcgcaatcgatctattccttccgcgccgcc
acggtgcgcaacattctcgattttccaacggagttctcaccgccggccgagatcatcacg
ctggatcgcaattaccgctcgacgcaaccgatcctcgccgcagccaacggcgtgatcaat
cttgccaaggagcgcttcaccaagaacctgtggaccgaccgggaatcggccgagcgtccg
cgcctcgtcacggtgcgcgatgaagccgaccaggcgcgcttcgtggccgaggaagtgttg
gagaaccgcgagggcggcatgcgcctgaaggaacaggcggttctgtttcgcgccagccat
catagcggtccgttggaagtcgaactgacgcggcggaacattcccttcatcaaattcggc
ggcctcaaattcctcgacagcgcgcatgtgaaggacatgctggccgcgctgcggttcgcg
cagaatccacgcgatcgcgtcgccggcttccgggtgatgcaattgctaccgggcgttgga
ccatcgtgggcgcagacggttctcgacgccatggcagatcggccggacccgatcagcatc
atcggtgatttgccctgcccgccgcgtgccgccgccgattggccgggtttcgtcgcgctg
cttcgacaattgggcggacgcagcgccggctggccggcggagatcgcgcaggtgcgcgac
tggtacgagccacatctcgaccgcatgcacgagcacgcggacatgcgcaaagccgatctg
ctccagctcgaggatatcgcggcaggctatccgtcgcgcgagcgctttcttacggaattg
acgctcgatccgccggatgcgacgtcgggtcaggctgggatccccttgctcgatgaggat
tatctgatcctctcgaccattcattccgccaagggtcaggaatggaaatcggtcttctta
ctcaataccgtcgacggctgcatcccgtccgatctcggcgcaggcacctccgccgagatc
gaggaagagcggcggctgctctatgttgcgatgacgcgggccaaagacagcctatcgctc
attttgccacagcgcttcttcacccatggtcagtcggccaccggggaccgccatgtctat
gcctcgcgcacacggtttattcctccaaacctgctgcagcacttcgaaagccgggcctgg
ccgattgtcccgacggggcaagcaaccggacaggaagcgccgcgggtccgcgtcgatgtc
agcgcacggatgcggggcatgtggcgctag
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