Methylobacterium sp. 4-46: M446_0329
Help
Entry
M446_0329 CDS
T00679
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
met
Methylobacterium sp. 4-46
Pathway
met03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
met00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
M446_0329
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
met03021
]
M446_0329
03400 DNA repair and recombination proteins [BR:
met03400
]
M446_0329
Enzymes [BR:
met01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
M446_0329
Transcription machinery [BR:
met03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
M446_0329
DNA repair and recombination proteins [BR:
met03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
M446_0329
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
IDH
Motif
Other DBs
NCBI-ProteinID:
ACA14900
UniProt:
B0UHU5
LinkDB
All DBs
Position
complement(408496..409515)
Genome browser
AA seq
339 aa
AA seq
DB search
MVIQKNWQELIKPNKLEVVPGHDPKRVATVVAEPLERGFGTTLGNALRRVLLSSLQGAAV
TSVHIDGVLHEFSSIPGVREDVTDIVLNIKTIAIRSNSDAPKRMTLRKTGPGLVTAGDIS
TIGDIQILNPDLVLCTLDEGAEIRMEFTVATGKGYVPADRNRPEDAPIGLIPVDALFSPV
TKVSYRIENTREGQDLDKDKLTMTVETNGAVSPEDALAYAARIIQDQLQIFVNFEEPRKE
EAAPLAPQLPFNPALLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRK
SLNEIKEVLAAMGLHLGMDVPGWPPENIEDLAKRFEEHY
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
gtggtgattcagaagaactggcaagagctgatcaagccgaacaagctcgaagtcgttccg
gggcacgaccccaagcgcgtggcgaccgtggtggccgagcccctggagcgcggcttcggc
acgacgctcggcaacgcgctgcgccgcgtgctgctgtcgtccctgcagggcgcggccgtg
acctcggtccacatcgacggcgtgctgcacgaattctcctcgatcccgggcgtgcgcgag
gacgtcaccgacatcgtcctcaacatcaagaccatcgcgatccgctcgaacagcgacgcg
cccaagcgcatgaccctgcgcaagaccggccccggcctggtcacggcgggcgacatcagc
acgatcggcgacatccagatcctcaaccccgacctcgtgctgtgcacgctcgacgagggg
gccgagatccgcatggagttcacggtcgcgaccggcaagggctacgtcccggccgaccgc
aaccggcccgaggacgcgccgatcggcctcatcccggtcgacgcgctgttctcgcccgtc
acgaaggtgtcctaccgcatcgagaacacccgcgagggccaggatctcgacaaggacaag
ctgaccatgacggtcgagaccaacggcgcggtctcgcccgaggatgcgctcgcctacgcg
gcccgcatcatccaggaccagctccagatcttcgtgaacttcgaggagccccggaaggag
gaggcggccccgctcgcgccgcagctgcccttcaacccggccctgctcaagaaggtggac
gagctcgaactgtcggtccgctcggcgaactgcctgaagaacgacaacatcgtctatatc
ggcgacctgatccagaagacggaagccgagatgctgcggacgccgaatttcggccgcaag
tctctcaacgagatcaaggaagtgctcgccgcgatgggcctgcacctcggcatggacgtg
cccggctggccgccggagaacatcgaggacctcgccaagcgcttcgaggagcactactga
DBGET
integrated database retrieval system
