Methylobacterium sp. 4-46: M446_0489
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Entry
M446_0489 CDS
T00679
Name
(GenBank) double-strand break repair helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
met
Methylobacterium sp. 4-46
Brite
KEGG Orthology (KO) [BR:
met00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
met03400
]
M446_0489
Enzymes [BR:
met01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
M446_0489
DNA repair and recombination proteins [BR:
met03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
M446_0489
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
PDDEXK_1
UvrD_C
UvrD_C_2
AAA_30
DEAD
Motif
Other DBs
NCBI-ProteinID:
ACA15052
LinkDB
All DBs
Position
complement(573040..576513)
Genome browser
AA seq
1157 aa
AA seq
DB search
MGIEGFVVDAVTQTAQRRAADPRASAWVSANAGAGKTKVLTDRVVRLLLHGAPPAKILCL
TFTKAAAANMAIRVFERLGRWVTLPEEALRAELTALEGERPDPATLRRARRLFARAVETP
GGLKIETLHALCERLLHLVPFEANVPARFVVLDEAQTREAVDRTIDNVLADAVDGTRPDL
AQALARVAPEAAGEALRRAIGEAVRARAVLLHPQGLPARLERLREALGLAPDEAVGTIEA
RMREGAPADWAGLAAQLRTGKATDEKRADALARAAAAEEPQDLPLYLAAFFKDEGEGDPY
APASLGTKAVPEAVRRLLLDEQARLGRLRERLKAARAQERTAALFTLAAEIHRRVEAQKA
RLGALDFDDLIHKTLDLLTRVDSAWVLYKLDRGVDHVLIDEAQDTNPEQWEILRRITEDF
CAGEGARRGPLPRTRFAVGDPKQSIYSFQGAAPEEFETTRQAWRRAARGAGLAFEDVGLT
LSFRSAKGVLRGVDATFALAEHYRGLSFGDGAIGTVHETVRVGAPGQVELWPTEEPCEEP
EPDAWVQPVDAVEAGAPALVVARRVARAVRHWTREGDEHGRIWRPGEILILVRKRSAAFE
GVIRALKAEDVPVAGQDRLDIAAHIAVMDLVAAGRAALLPDDDLTLACALKTPLVGLTDD
DLVRLAARRAPEESLAAALARHAGAGDPAALRGAAALATWRRLAQESGPFGFYADLLGPL
GGRARLVARLGGEAGDAIDVFLTAAAQAEQGADAPSLTGFLSRYAPSGGRDAGGHTVKRD
LESARDEVRVMTVHGAKGLEAGLLVLIDGCEPLGRNDPPLLPVPVRGAGGVADGTVPVWS
PSKGHDCPAGAAAREALHERARQEHNRLLYVAMTRAKDRLVIAPYRGRDRETPESWCEMV
RRGLVAAFGGVERAEMPYGPAETWRHGAALPAAPATAVPPAPPGERPDWLFRPVAPEAEP
LPPLRPSGLGAADEPRRSQPRSGDPAARRRGVLIHALLEHLPALAPERRAAAARAFVAAR
APGLPAAEREALATSVLRLLADPDLSVLFGPLARAEVALAGTVSLGGVEWPVHGRIDRLA
VTEEAVWLCDFKTGRPPAEGAPVPGGMAAQVALYAALLARIHPDRAVIPLLVWTAGPVIR
RLSGAECAAALAALRPA
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
atggggatcgagggattcgtggtcgatgcggtcacgcagaccgcgcagcgccgcgccgcg
gatccgcgcgcctccgcctgggtgtcggccaatgcgggggccggcaagaccaaggtgctc
accgaccgggtcgtgcggctcctgctgcacggggcgccgccggccaagatcctctgcctc
accttcaccaaggcggcggccgccaacatggcgatccgcgtcttcgagcggctcgggcgc
tgggtgaccctgccggaggaggcgttgcgcgccgaactcaccgccctcgagggcgagcgg
cccgaccccgcgaccctgcgccgggcgcggcgcctcttcgcccgcgcggtcgagacgccg
ggcggcctcaagatcgagacgctgcacgcgctctgcgagcggctcctccacctcgtcccg
ttcgaggcgaatgtgccggcccgcttcgtcgtcctcgacgaggcccagacccgcgaggcg
gtggaccgcacgatcgacaacgtgctggcggacgcggtggacggcacccgcccggacctc
gcccaggccctcgcccgggtcgcgcccgaggcggcgggcgaggccctgcgccgggcgatc
ggcgaggcggtgcgcgcccgcgccgtcctcctccacccgcagggcctgccggcgcgcctg
gagcgcctgcgcgaggcgctcggcctcgccccggacgaggcggtcgggacgatcgaggcg
cggatgcgggagggcgcccccgccgactgggccgggctcgccgctcagctccgcaccggc
aaggccacggacgagaagcgggccgacgcgctcgcgcgcgccgcggcggcggaggagccg
caggacctgccgctctacctcgcggcgttcttcaaggacgagggggagggcgacccctac
gccccggcgagcctcggcaccaaggcggtgccggaggcggtgaggcggctgctcctcgac
gagcaggcccggctcgggcgcctgcgcgagcggctgaaggccgcccgcgcgcaggagcgc
accgccgccctgttcaccctcgcggccgagatccaccggcgggtcgaggcccagaaggcc
cgcctcggcgccctcgacttcgacgacctgatccacaagaccctcgacctgctgacccgg
gtcgattcggcctgggtgctctacaagctcgaccgcggcgtcgaccacgtgctgatcgac
gaggcgcaggacaccaatcccgagcaatgggagatcctgcgccggatcaccgaggatttc
tgcgccggcgagggcgcgcgccgcggccccctgccgcgcacccgcttcgccgtgggcgac
ccgaagcagtcgatctacagcttccagggggcggcgcccgaggagttcgagacgacccgg
caggcgtggcgccgggccgcgcgcggggccgggctcgccttcgaggatgtcgggctcacg
ctctccttccgctcggccaagggcgtgctgcgcggggtcgacgccaccttcgccctcgcc
gagcattaccgcggcctgtccttcggcgacggggcgatcggcaccgtgcacgagacggtg
cgggtcggcgcgcccgggcaggtggaattgtggccgaccgaggagccctgcgaggagccg
gaacccgacgcctgggtccagccggtcgacgccgtcgaggccggggcgccggccctagtg
gtggcgcggcgggtcgcccgcgcggtgcggcactggacgcgggagggcgacgagcacggc
cggatctggcgaccgggcgagatcctgatcctggtccgcaagcgctcggcggccttcgag
ggggtgatccgggcgctcaaggccgaggacgtgccggtggccggccaggaccggctcgac
atcgcggcccacatcgccgtcatggacctcgtcgcggccggccgcgcggcgctcctgccc
gacgacgacctgacgctggcctgcgccctcaagactcccctggtcggcctcacggacgac
gacctcgtgcggctcgcggcccggcgcgcgcccgaggaatccctcgccgcggcgctggcg
cggcacgcgggcgcgggggacccggcggcgttgcggggcgcggcggcgctcgccacctgg
cggcgcctcgcgcaggagagcggccccttcggcttctacgcggacctgctcgggcccctg
ggcgggcgggcgcgcctcgtcgcccggctggggggcgaggccggggacgccatcgacgtc
ttcctcaccgcggcggcccaggccgagcagggggcggacgcgccctccctcacgggtttc
ctctcgcgctacgccccgagcggcgggcgcgacgcgggcgggcacacggtcaagcgcgac
ctcgaatcggcccgcgacgaggtgcgggtgatgaccgtgcacggcgccaagggcctggag
gcgggcctcctcgtgctgatcgacggctgcgagcccctcggccgcaacgacccgccgctc
ctgcccgtcccggtccgcggcgcgggcggcgtcgccgacgggacggtgccggtctggtcg
ccctccaagggacatgattgcccggcgggcgcggcggcccgcgaggccctgcacgagcgg
gcgcgccaggagcacaaccgcctgctctacgtggcgatgacccgggccaaggaccgcctc
gtcatcgccccctatcgcggccgcgaccgggagaccccggaatcctggtgcgagatggtc
cgacgcggcctcgtggcggccttcggcggcgtcgagcgggccgagatgccctacgggccg
gccgagacgtggcggcacggggccgcgctgccggccgccccggccacggcggtgccgccg
gcgccgcccggggagcggccggactggctcttccgcccggtcgcgcccgaggccgagccg
cttccgccgctgcgcccgtccggcctcggcgccgccgacgagccgcgccggtcgcagccg
cgctccggcgacccggcggcgcgccgccgcggcgtgctgatccacgccctgctggagcac
ctgccggccctggcgccggagcggcgcgcggcggcggcgcgcgccttcgtggcggctcgc
gcgccgggcctcccggcggcggagcgggaggcgctcgcgacttcggtcctgcgcctcctc
gccgatcccgacctctcggtgctgttcggacccctggcccgggccgaggtggcgctcgcc
gggacggtgagcctgggcggcgtggaatggccggttcacggccggatcgaccggctcgcc
gtgaccgaggaggcggtctggctctgcgacttcaagaccggccgtccgcccgccgagggc
gccccggtcccgggcgggatggccgcgcaggtggcgctctacgcggctttgctcgcccgg
atccatccggaccgcgccgtgatcccgctcctcgtctggacggccggtccggtgatccgg
cgcctgagcggggccgagtgcgcggcggcgctggcggcgcttcgtcccgcctga
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