Methylobacterium sp. 4-46: M446_0491
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Entry
M446_0491 CDS
T00679
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
met
Methylobacterium sp. 4-46
Brite
KEGG Orthology (KO) [BR:
met00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
met03400
]
M446_0491
Enzymes [BR:
met01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
M446_0491
DNA repair and recombination proteins [BR:
met03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
M446_0491
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
ACA15054
LinkDB
All DBs
Position
complement(577359..580481)
Genome browser
AA seq
1040 aa
AA seq
DB search
MSAARIFTIPPGAPFLATLADALLDGTLVGPVAQGPLGLAAVTLFLPTRRATRALAAELA
ARCGPAVLLPRMTPLGEADEAELDLAALAPGECPEAVAHPPIPALERRLILARLVQAWAA
GIDRRLLPMGEEVPFRVPSSPADAVGLAADLEGLMDALTVEGLPWDEIGRAVEAEYSQYF
SLTLDFVRIAAEHWPAILAERGVSDPVARGRALVLAEAARLRRERPADPIVVAGSTGSIP
ATAALIGAIAAMPRGAVVLPGLDLALDEEGWAAIETGEAVAHGHPQAILHRLLRGLDCPR
AAVRPLGAPGPAARARAELLSQALRPAETTDAWADLDPGAREALARAGGAGLALVEAADE
REEALAIAVALREALERPDCRAALITPDRGLARRVAAELGRWEIVAEDTAGQPLALSLAG
RLARLATDVAALDAKPERVLALLAHPMVRLGLARPALERAAAALEIGVLRGPAPAKGFAG
LAEALRVARGGERPHAPRPVRRLTQADWEAAADLVARLDRAFRDFAPRDFAPDQEEGVRD
LVALAQAHRETCDLLLDGPDAPQDEPSVAVLDGLFDDLALAQAGMLEGRFSDYPAFFTAL
ARERVVSARAERPHPRLRILGLLEARLLRVDRVVLGGLDEGVWPPKAETDAFLNRPMRAA
VGLSSPERRLGQTAHDLVQALGCPDAVITRAHKREGSPTVPSRFLQRLRAFMGEAAWSGC
LAAGGRLRALAASLDRGTEPLPPRPARPAPRPDPALFPRALSVTEVETLVRDPYGIFARH
VLGLDPLEPVAVQPSASDRGTIVHDVLGGFAQRFPEALPADPRLPLYDLAVNAFAPIADA
YPELYAEWWPRFERMAASFLAWEVERRPGLRRVHAEISGRWRIPIGPAEDFTLRARADRI
EARRDGGHVIVDFKTGQPPSAREVFAGFAPQLTLEAAMLQAGGFRDLGPGTGAPELLYVR
ASGGKVPLDPVPLKPPRGEARSVEELIDEHARRFQGLVARFLRGEAAYLSRPYPKYARAF
SPYDHLARVKEWSLVEGEGA
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgcggcccggatcttcaccatcccgcccggcgcgccgttcctggcgaccctcgcc
gacgcgctcctcgacggcacgctcgtcggcccggtcgcgcaggggccgctcggcctcgcc
gccgtcacgctcttcctgccgacccggcgcgccacccgggcgctcgccgcggaactcgcc
gcgcgctgcgggccggcggtgctgctgccgcggatgacgcccctcggcgaggcggacgag
gccgagctcgacctcgcggcgctcgcccccggcgagtgcccggaggcggttgcgcacccg
ccgatccctgccctggagcggcgcctgatcctcgcccgcctcgtccaggcctgggccgcc
ggcatcgaccgccggctcctgccgatgggcgaggaggtgcccttccgggtgccgtcctcg
ccggccgacgcggtcggcctcgcggccgatctcgaggggctgatggacgcgctcaccgtc
gagggcctgccctgggacgagatcgggcgcgccgtcgaggcggaatactcgcagtacttc
tcgcttaccctcgacttcgtgcgcatcgccgccgagcattggccggcgatcctggccgag
cggggcgtcagcgacccggtggcgcggggccgcgccctggtgctcgccgaggccgcgcgc
ctgcgccgcgagcgcccggccgacccgatcgtggtggccggctcgaccggctcgatcccc
gccaccgccgccctgatcggggccatcgcggcgatgccgcgcggggcggtggtgctgccc
ggcctcgacctcgccctcgacgaggagggctgggcggcgatcgagaccggggaggcggtc
gcgcacggccacccgcaggcgatcctgcaccggctcctgcgcggcctcgactgcccccgc
gccgcggtgcggcccctcggcgcgccgggaccagccgcgcgggcccgggccgaactcctg
tcgcaggccctgcgcccggccgagaccacggatgcctgggcggatctggatcccggggcg
cgcgaggcgctcgcccgcgcgggcggcgccgggctcgccctcgtcgaggcggccgacgag
cgcgaggaggcgctcgccatcgcggtggccctgcgcgaggcgctggagcggccggattgc
cgcgccgccctgatcaccccggaccgcggcctcgcccgccgggtcgcggcggagctcggg
cgctgggagatcgtggcggaggacacggccgggcagccgctggcgctgagcctcgccggg
cgcctcgcgcggctcgccaccgacgtcgccgccctcgacgccaagcccgagcgggtgctg
gcgctcctcgcccatccgatggtgcggctcggcctggcccggcccgcgctggagcgggcc
gccgccgccctggagatcggggtgctgcgcggtcccgctcccgccaagggcttcgccggc
ctcgccgaggcgctccgggtcgcgcgcggcggcgagcgcccgcacgccccccggccggtg
cggcggctgacccaggccgattgggaggcggcggccgacctcgtcgcccggctcgaccgc
gctttccgggatttcgccccccgagatttcgcccccgaccaggaggagggcgtccgcgac
ctcgtcgccctggcgcaggcccatcgcgagacctgcgacctcctgctcgacgggcccgac
gcgccgcaggacgagccctcggtcgcggtgctcgacgggctcttcgacgatctcgccctc
gcgcaggcgggcatgctggagggccggttctcggattacccggccttcttcaccgcgctc
gcccgcgagcgggtggtgagcgcgcgggcggagcgcccgcatccgcggctgcgcatcctc
ggcctcctggaggcgcggctgctgcgggtcgaccgcgtggtcctgggcggcctcgacgag
ggcgtctggccgcccaaggccgagacggacgccttcctgaaccggccgatgcgcgcggct
gtgggcctctcctcgccggagcgccgcctcggccagaccgcccacgacctcgtgcaggcg
ctcggctgcccggacgcggtgatcacccgcgcccacaagcgcgagggctcgccgaccgtg
ccgtcgcgcttcctgcagcggctgcgcgccttcatgggggaggcggcgtggtccggctgc
ctcgcggcgggcgggcggctgcgggcgctggcggcgtccctcgaccggggcaccgagccg
ctgccgccccgcccggcgcgcccggccccgaggccggaccccgccctgttcccgcgcgcg
ctcagcgtcaccgaggtcgagaccctggtgcgcgacccctacgggatcttcgcgcggcac
gtgctgggcctcgacccgctggagccggtggcggtgcagccgagcgccagcgaccggggc
acgatcgtgcacgacgtgctgggcggcttcgcgcagcgcttccccgaggcgctgcccgcg
gatccgcgcctgcccctctacgacctcgcggtcaacgccttcgcgccgatcgccgatgcc
tatccggaactctacgcggagtggtggccgcgcttcgagcgcatggcggcgtccttcctc
gcctgggaggtggagcggcggccgggcctcaggcgggtccatgccgagatctcgggccgc
tggcggatcccgatcggccccgccgaggacttcaccctgcgcgcccgggccgatcggatc
gaggcgcgccgggacggcggccacgtcatcgtcgacttcaagaccggccagccgccgagc
gccagggaggtcttcgccggcttcgcgccgcagctcaccctggaggccgcgatgctgcag
gcgggcggcttccgcgatctcggcccgggaaccggcgcgccggagctgctctacgtgcgg
gcgagcggcggcaaggtgcccctcgacccggtgccgctcaagccgccgcggggcgaggcc
cgctcggtcgaggagctgatcgacgagcatgcgcgccgcttccagggcctcgtcgcccgc
ttcctgcggggcgaggcggcctacctgtcgcggccctacccgaaatacgcccgcgccttc
tcgccctacgaccacctcgcgcgggtgaaggaatggtcgctggtggagggggagggggcg
tag
DBGET
integrated database retrieval system
