Methylobacterium sp. 4-46: M446_1377
Help
Entry
M446_1377 CDS
T00679
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
met
Methylobacterium sp. 4-46
Pathway
met03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
met00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
M446_1377
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
met03021
]
M446_1377
03019 Messenger RNA biogenesis [BR:
met03019
]
M446_1377
Transcription machinery [BR:
met03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
M446_1377
Messenger RNA biogenesis [BR:
met03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
M446_1377
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_22
OB_RNB
NACHT
S1CSD-TOTE-2
AAA
AAA_25
AAA_14
Motif
Other DBs
NCBI-ProteinID:
ACA15893
LinkDB
All DBs
Position
1514745..1516055
Genome browser
AA seq
436 aa
AA seq
DB search
MIEDTIAPVETFTPPMREVKLQDLKSKTPTELIAFAEEVEVENASTMRKQELMFAILKQL
AAKDVEIIGAGTVEVLQDGFGFLRSSDSNYLPGPDDIYVSPTQIRRFGLRTGDTVEGPIR
GPKDGERYFALLKVNTINFENPDKIKHKVHFDNLTPLFPTQRFKLELSEPTRKDFSPRVI
DIVSPIGKGQRALIVAPPRTGKTVLMQNIAQSITINHPECYLIVLLIDERPEEVTDMQRS
VKGEVIASTFDEPATRHVQVAEMVIEKAKRLVEHGRDVVILLDSITRLGRAYNTVVPSSG
KVLTGGVDANALQRPKRFFGAARNIEEGGSLSIIATALIDTGSRMDEVIFEEFKGTGNSE
IILDRKVADKRTFPAIDITRSGTRKEELLVPPDTLKKTYVLRRILNPMGVTDAIEFLLDK
LRQTKSNQDFFDSMNT
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgattgaagacaccatcgcccccgtcgagaccttcacgccccccatgcgggaggtgaag
ctccaggacctgaagtcgaagacgccgaccgagctgatcgccttcgccgaagaggtcgag
gtcgagaacgcctcgaccatgcgcaagcaggaactgatgttcgcgatcctgaagcagctc
gctgccaaggacgtcgagatcatcggggccggaaccgtcgaggtgctgcaggacggcttc
ggcttcctgcgctcctcggattccaactacctgccggggccggacgacatctacgtgtcg
ccgacccagatccgccgcttcggcctgcgcaccggcgacaccgtcgaggggccgatccgg
ggtcccaaggacggcgagcgctacttcgcgctcctgaaggtgaacaccatcaatttcgag
aacccggacaagatcaagcacaaggtccatttcgacaacctgacgccgctgttcccgacc
cagcgcttcaagctcgagctcagcgagcccacccgcaaggacttctcgccgcgggtgatc
gacatcgtctcgccgatcggcaagggccagcgcgcgctgatcgtggcgccgccgcgcacc
ggcaagacggtgctgatgcagaacatcgcccagtcgatcaccatcaaccacccggaatgc
tacctgatcgtgctgctcatcgacgagcggcccgaggaggtcaccgacatgcagcgctcg
gtgaagggcgaggtgatcgcctccaccttcgacgagccggcgacccgccacgtgcaggtg
gccgagatggtgatcgagaaggccaagcgcctcgtcgagcacggccgcgacgtggtgatc
ctgctcgactcgatcacccgcctggggcgggcctacaacacggtggtgccgtcctccggc
aaggtgctcaccggcggcgtcgacgccaacgccctgcagcggcccaagcgcttcttcggc
gcggcccgcaacatcgaggagggcgggtccctcagcatcatcgcgaccgcgctgatcgac
accggctcgcgcatggacgaggtgatcttcgaggagttcaagggcaccggcaattccgag
atcatcctcgaccgcaaggtcgcggacaagcgcaccttcccggccatcgacatcacccgc
tcgggcacccgcaaggaggagctgctggtgccgcccgacaccctcaagaagacctacgtg
ctccgccgcatcctcaacccgatgggcgtgaccgacgcgatcgagttcctgctcgacaag
ctgcggcagacgaagagcaaccaggacttcttcgactcgatgaacacctga
DBGET
integrated database retrieval system
