Methylobacterium sp. 4-46: M446_1688
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Entry
M446_1688 CDS
T00679
Name
(GenBank) Exonuclease RNase T and DNA polymerase III
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
met
Methylobacterium sp. 4-46
Pathway
met03030
DNA replication
met03430
Mismatch repair
met03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
met00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
M446_1688
03430 Mismatch repair
M446_1688
03440 Homologous recombination
M446_1688
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
met03032
]
M446_1688
03400 DNA repair and recombination proteins [BR:
met03400
]
M446_1688
Enzymes [BR:
met01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
M446_1688
DNA replication proteins [BR:
met03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
M446_1688
DNA repair and recombination proteins [BR:
met03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
M446_1688
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
ACA16181
LinkDB
All DBs
Position
complement(1885063..1885623)
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AA seq
186 aa
AA seq
DB search
MRTLAIDFETANERRDSACAVGLAWIEDGRVVRREARLIRPPDLRFSPFNIRVHGIRPED
VADAKPFGEAMAPFLPEIAGALVLAHNASFDVGVLCAALAACGLPRPRFTSLCTVQLARR
QWPGEARYRLPILAERLGIPLRHHDAGEDAFACAQIALAAMREAGAPDLATLARRTGLGR
DRPGAA
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atgcgaacgcttgcgatcgatttcgagacggcgaacgagcgccgggacagcgcctgcgcg
gtgggcctcgcctggatcgaggacgggcgggtcgtgcgccgcgaggcccgcctgatccgg
ccgcccgacctgcgcttctcgcccttcaacatccgcgtccacggcatccggccggaggac
gtcgcggacgcgaagcccttcggggaggcgatggcgcccttcctgccggagatcgccggc
gccctggtcctcgcccacaacgcgagcttcgacgtcggcgtgctctgcgcggcgctcgcc
gcctgcgggctgccgcggccgcgcttcacctccctctgcacggtccagctcgcccggcgg
caatggcccggggaggcgcgctaccggctcccgatcctggccgagcggctcggcatcccg
ctgcgccaccacgatgccggcgaggacgccttcgcctgcgcgcagatcgccctcgcggcg
atgcgcgaggccggcgcgccggacctcgccaccctcgcccgccggaccgggctcggacgg
gaccggcccggggccgcttga
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