Methylobacterium sp. 4-46: M446_3437
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Entry
M446_3437 CDS
T00679
Name
(GenBank) RNA polymerase, sigma-24 subunit, ECF subfamily
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
met
Methylobacterium sp. 4-46
Pathway
met02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
met00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
M446_3437
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
met03021
]
M446_3437
Transcription machinery [BR:
met03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
M446_3437
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
Sigma70_r2
HTH_23
Sigma70_ECF
HTH_28
RovC_DNA-bd
MerR
HTH_11
Phage_terminase
HTH_24
TnsD
Motif
Other DBs
NCBI-ProteinID:
ACA17824
LinkDB
All DBs
Position
3816688..3817206
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AA seq
172 aa
AA seq
DB search
MGASPSLRNVSALDGLFREHSHWLLRWLSKQRWTVTSPEDLTSDVFLALLQIPDLGAVRQ
PRAMMTTIARRLICDARRRDDLRRAYENELAALPEAFEISAEERLILVQALQAIDAMLAG
LSRKARAAFLMSQIDGMPYAEIAAELNVSVSMVRKYVAQGLRAAVKARNVAG
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
atgggagcgtcaccgtcgcttcggaatgtctccgcgctcgatgggttgttccgtgagcac
agtcattggctgctgcgttggctgagcaagcagcgctggaccgtcacttcgccggaggat
ctcacctccgacgtgttcctggcgctgctgcagatccccgatctcggcgcggtccgtcag
ccgcgcgcgatgatgaccacgatcgctcggcggctgatctgcgacgcacgtcggcgcgac
gatctccgccgcgcctacgagaacgagctggcggccctgcccgaggcgttcgagatttcc
gcagaggaacgcctcatccttgtgcaggcgctccaggccatcgacgcgatgctcgcgggc
ctctcgcggaaggcgcgcgcggccttcctgatgagccagatcgacggcatgccctacgcg
gagatcgcggccgaactgaacgtctcggtcagcatggtgcgcaaatacgttgcgcagggt
ctgcgcgcggccgtaaaagcgcggaacgtcgcgggctga
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integrated database retrieval system
