Methylobacterium sp. 4-46: M446_3487
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Entry
M446_3487 CDS
T00679
Name
(GenBank) Collagen triple helix repeat
KO
K06236
collagen type I alpha
Organism
met
Methylobacterium sp. 4-46
Pathway
met04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
met00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
M446_3487
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
met00536
]
M446_3487
Glycosaminoglycan binding proteins [BR:
met00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
M446_3487
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Hint_2
Hom_end_hint
Motif
Other DBs
NCBI-ProteinID:
ACA17872
LinkDB
All DBs
Position
complement(3891684..3894230)
Genome browser
AA seq
848 aa
AA seq
DB search
MAYGTITVTANFVQPLTNAVSNSGIVLLYDTTGTSTLSASNFIGSSGYYFTPSGSTTGTS
AYFSLTTTATVGSGRSFTAIIENPTYFNSPAPTSLTSSAVYNSNGQDTGASATLSAGGVD
KANGLGGANYDVNYAKLVFSNVTVTAGGGAPGPTGASGATGATGATGATGSGATGATGAT
GATGTGATGPTGAAGSTGATGTAGATGATGAGATGATGATGATGDTGPTGAGATGATGAT
GAGATGATGSDGATGAAGATGATGSAGATGATGTAGTTGATGAAGADGAGGATGSTGAAG
ATGATGADGARGATGRDGAAGATGGTGAAGATGGTGAAGSTGAAGATGATGADGARGATG
RDGVAGATGGTGAAGATGATGADGARGATGRDGATGATGSMGAAGATGATGIGATGSAGS
TGAAGATGATGADGARGATGRDGAAGATGSTGAAGATGATGIGATGSAGSTGAAGADGAR
GATGRDGAAGATGSTGAAGATGATGADGARGATGRDGATGATGSMGAAGATGATGIGATG
SAGSTGAAGATGATGADGARGATGRDGAAGATGSTGAAGATGPAGATGAGGTTGATGAAG
ATGTAGATGATGSTGPAGATGATGPECFTHGTRLLTLTGARRVEDLAVGDRLLTAAGEAR
PVVWIGRRRLRPDAHPRPDRVRPVRIRAGALAPGLPERDLLLSPGHGVLFAGHLIPAGLL
VDGRGVAVEAVAEVEYLHVELDLHDVVLAEGVPCESYLDAGQRADFEEAGGVTRLHPVFL
PLTYEAACAPLAVAGPVLAAARAQIAARAEAQAEAAAQAEAQVGAQVEAQAEAAAREGEA
APRRRPAG
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atggcctacggaacgatcacggtaacggcaaatttcgtacagcccctaacaaatgcagtt
tcgaattcaggcatcgtacttctttatgacacgaccggcacatcgaccctgtctgcatct
aattttattggatcttcaggatattactttacaccctcaggcagcaccacaggaacttcc
gcatatttctcgctgacaaccacggcgaccgtcggaagcggccgcagcttcaccgccatc
atcgaaaatccaacctactttaattcaccagcaccgacgagcctcaccagttcagcagtc
tacaattcgaatggccaggataccggcgcgtccgcaacacttagtgctggcggcgtcgac
aaggcaaacggtttgggtggagcgaactatgacgtgaattacgcgaagctcgtcttctcg
aatgtcaccgtcacggccggagggggcgcacccgggccgacaggtgccagcggcgcaacg
ggcgcaacgggcgccactggcgcaacggggagcggagccacaggcgcgacaggggccacc
ggcgccacgggcacgggcgcgaccgggccgaccggggccgcgggctccaccggcgcgacg
ggcacggccggtgcgacgggcgccacgggagcgggcgccacaggcgccacaggcgcgacc
ggtgcgacgggagacacgggccccacgggcgcgggggcgaccggagccacaggcgcgacg
ggcgcgggggcgaccggcgccacgggatcggatggcgcgaccggcgccgcgggcgcgacc
ggtgcgacgggatccgccggtgcgacgggggcgacgggcacggcggggaccacgggcgcg
accggcgccgcgggcgcggatggcgccgggggcgcgaccggcagcaccggcgccgcgggc
gcgacgggtgccaccggcgcggacggcgcgaggggcgccacgggcagggacggcgccgcg
ggggcgaccggcggcacaggggccgcaggcgcaaccggcggcacgggagcggccggcagc
accggcgccgcgggcgcaacgggtgccaccggcgcagatggcgcgaggggcgccacgggc
agggacggcgttgccggggcgaccggcggcacgggggctgcgggtgcgaccggcgccacg
ggcgcggacggcgcgaggggtgccacgggcagggacggcgccaccggggcgaccggcagc
atgggggctgcgggtgcgaccggcgcgaccggaatcggtgcgacggggtcggccggcagc
accggcgccgcgggcgcgacgggtgccaccggcgcggacggcgcgaggggcgccacaggc
agggacggcgccgcgggggcgaccggcagcacgggggctgcgggtgcgaccggcgcgacc
ggaatcggcgcgacggggtcggctggcagcaccggcgccgcgggcgcagatggcgcgagg
ggcgccacgggcagggacggcgctgccggggcgaccggcagcacgggggccgcaggcgca
accggcgccacgggcgcggacggcgcgaggggtgccacgggcagggacggcgccaccggg
gcgaccggcagcatgggggctgcgggtgcgaccggcgcgaccggaatcggtgcgacgggg
tcggccggcagcaccggcgccgcgggcgcgacgggtgccaccggcgcggacggcgcgagg
ggtgccacgggcagggacggcgctgccggggcgaccggcagcacgggcgccgcgggcgcg
accggtcccgctggggccacgggcgccggcggcacgaccggcgcgacgggggcggccggg
gcgacgggcaccgccggagccaccggcgcgaccgggagcaccggaccggccggggccacc
ggcgccaccggccccgaatgcttcacccacggcacccgcctgctcacgctcacgggcgcg
cgccgcgtcgaggatctcgcggtcggcgaccgcctcctcaccgccgccggcgaggcccgg
ccggtggtctggatcgggcgccgccgcctgcgccccgacgcccatccccgccccgaccgc
gtccgcccggtgcggatccgggccggggccctggcgccgggcctgccggagcgcgacctc
ctgctctcgcccggccacggggtgctgttcgccggccacctgatcccggccggcctgctg
gtcgacgggcgcggcgtggcggtggaggccgtggccgaggtggagtacctgcacgtggaa
ctcgacctgcacgacgtggtcctggccgagggcgtgccctgcgagagctacctcgatgcc
gggcagcgggcggatttcgaggaggcgggcggggtgacgcgcctgcacccggtcttcctg
ccgctgacctacgaggcggcctgcgcgccgctggcggtggccggcccggtgctggcggcg
gcgcgggcgcagatcgcggcccgggcggaggcccaagccgaggccgcagcccaagccgag
gcccaagtcggggcccaagtcgaggcccaagccgaggccgcggcgcgggagggcgaggcc
gcgccgcgccggcggccggccgggtga
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