Methylobacterium sp. 4-46: M446_3787
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Entry
M446_3787 CDS
T00679
Name
(GenBank) Holliday junction DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
met
Methylobacterium sp. 4-46
Pathway
met03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
met00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
M446_3787
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
met03400
]
M446_3787
Enzymes [BR:
met01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
M446_3787
DNA repair and recombination proteins [BR:
met03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
M446_3787
RecFOR pathway proteins
M446_3787
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
Mg_chelatase
AAA_3
AAA_22
AAA_16
AAA_14
AAA_2
AAA_17
AAA_18
nSTAND3
Rad17
AAA_33
TsaE
NTPase_1
RNA_helicase
AAA_28
DUF815
ABC_tran
NB-ARC
NACHT
AAA_24
IstB_IS21
AAA_7
Sigma54_activ_2
AAA_19
Cytidylate_kin
Motif
Other DBs
NCBI-ProteinID:
ACA18165
LinkDB
All DBs
Position
4218775..4219854
Genome browser
AA seq
359 aa
AA seq
DB search
MRPRGGGGVSGPAARRVAGSRLAPITEAGEVPDGSIRPLSLSDFTGQRAARANLGVFIEA
ARRTGQALDHVLFVGPPGLGKTTLAQIVARELGVNFRSTSGPVIAKAGDLAAQLTNLEER
DVLFIDEIHRLNPAVEEILYPAMEDYQLDLIIGEGPAARSVKIELPRFTLVAATTRAGLL
TTPLRDRFGIPIRLEFYAVDELEAIVARGARVLGIGMAADGANEIARRARGTPRIAGRLL
RRVRDFAIVEEAGTVTRAIADRALRLLDVDAAGLDTMDRKYLGLIARSYGGGPVGVETIA
AALSEPRDAIEEIIEPYLLQQGFVQRTPRGRLLTPHAFRHLGLPVPVREEEPLDAALPE
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgcggccccgcggcggtggcggcgtgagcggcccggcggcccgcagggtggcgggctcc
cggctcgccccgatcacggaggccggcgaggtcccggacgggtcgatccgtccactgagc
ctgtcggatttcacgggccagcgcgcggcgcgggcgaatctgggggtgttcatcgaggcg
gcgcggcgcaccggtcaggcgctggaccacgtgctgttcgtgggcccgccggggctgggc
aagaccacgctggcccagatcgtggcccgggagctgggggtgaatttccgctcgacctcg
ggtccggtgatcgccaaggcgggggacctggccgcgcagctcaccaacctggaggagcgc
gacgtcctgttcatcgacgagatccaccggctgaacccggcggtggaggagatcctctac
ccggccatggaggattaccagctcgacctgatcatcggcgagggcccggcggcgcgctcg
gtcaagatcgagctgccgcgcttcaccctggtggcggccacgacccgggcgggtctgctg
accacgccgctgcgcgaccgcttcggcatcccgatccggctggaattctacgcggtggac
gagctggaggcgatcgtggcccggggggcgcgggtgctggggatcggcatggcggcggac
ggggccaacgagatcgcccggcgggcgcggggcacgccgcggatcgccgggcggctgctg
cggcgggtgcgggacttcgcgatcgtggaggaggccgggacggtgacgcgggcgatcgcc
gaccgggcgctgcgtctgctggacgtggacgcggcgggtctggacaccatggaccgcaag
tatctggggctgatcgcgcgctcctacgggggcggtccggtcggggtggagacgatcgcg
gcggcgttgtcggagccgcgcgacgccatcgaggagatcatcgagccctacctgctccag
cagggcttcgtgcagcgcaccccgcgcggccgcctcctcaccccgcacgccttccgacac
ctcggcctgcccgtgccggtgcgcgaggaggagcccctcgacgccgccctgccggagtga
DBGET
integrated database retrieval system
