Methylobacterium sp. 4-46: M446_4243
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Entry
M446_4243 CDS
T00679
Name
(GenBank) DNA polymerase III, subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
met
Methylobacterium sp. 4-46
Pathway
met03030
DNA replication
met03430
Mismatch repair
met03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
met00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
M446_4243
03430 Mismatch repair
M446_4243
03440 Homologous recombination
M446_4243
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
met03032
]
M446_4243
03400 DNA repair and recombination proteins [BR:
met03400
]
M446_4243
Enzymes [BR:
met01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
M446_4243
DNA replication proteins [BR:
met03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
M446_4243
DNA repair and recombination proteins [BR:
met03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
M446_4243
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DUF3646
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
AAA_22
RuvB_N
AAA_16
AAA_5
AAA_30
AAA_18
AAA_14
RCF1-5-like_lid
AAA_assoc_2
AAA_19
SRP54
AAA_24
TsaE
PMAIP1
nSTAND3
AAA_2
Rad17
Motif
Other DBs
NCBI-ProteinID:
ACA18592
LinkDB
All DBs
Position
complement(4679654..4681471)
Genome browser
AA seq
605 aa
AA seq
DB search
MDETTGTPSTDEPGFPGLAPPAAPAAAPYRVLARKYRPQSFDDLIGQGAMVRTLANAFEA
GRIPQAWMLTGVRGVGKTTTARILARGLNYALAGDAKAGPTIRMPTLGLHCAAIMESRHI
DVLEMDAASHTGIDDVRQIIDGIRYAPVSARYKVYIVDEVHMLSEKAFNAFLKTLEEPPP
HAKFVFATTEIRKVPVTILSRCQRFDLRRVEAGTLVAHLHRICDAEGVAVEPEALAAIAR
AAEGSVRDSLSLLDQAIAHGAGRVTAETVRDMLGLADRARIIDLFEAAMRGDAPAAFAEL
HGQYEAGADPAVVLQDLAGFTHLVTRLKVAPETARADTALSEAERGRGSDFADRLSVRAL
SRAWQILLRAIPEVQAAPRPLAAAEMALVRLIYAADLPTPDEALRQVREGGGAAVPPAGR
PLPAAPPGPALRALPDARPAQSAAAARPAAAPAQAQHAAEPALRLRRFEDVVALAEAKRD
IGLKAALERDVHLVRFEEGRIEFRLAEAGRPSLANDLARALDLWTGRRWVVALSRETGEA
TLAARAEAARESRHQGAAAHPLVQEVLKRFPGAQIVDVRERPPEAPAEEFSPEEFSAPEE
PEADQ
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggacgagaccaccggcacgccctcgaccgacgagccgggtttcccgggtttggccccg
ccggcggcgccggccgccgcgccctaccgggtgctggcgcgcaagtaccgcccccagagc
ttcgacgacctgatcggccagggtgccatggtgcgcaccctggcgaacgccttcgaggcc
gggcgcatcccgcaggcctggatgctcaccggcgtgcgcggggtgggcaagaccaccacc
gcccgcatcctggcgcgcgggctcaactacgccctcgccggggacgcgaaggccggcccg
acgatccggatgccgacgctcggcctgcattgcgcggcgatcatggaatcccggcacatc
gacgtgctggagatggacgccgcctcccataccggcatcgacgacgtccgccagatcatc
gacggcatccgctacgccccggtctcggcgcgctacaaggtctacatcgtcgacgaggtc
cacatgctgtccgagaaggcgttcaacgccttcctgaagacgctggaggagcccccgccg
cacgcgaaattcgtcttcgccaccaccgagatccgcaaggttccggtgacgatcctgtcg
cgctgccagcgcttcgacctgcgccgggtcgaggcgggcacgctcgtcgcccacctgcac
aggatctgcgacgccgagggcgtggcggtggagcccgaggcgctcgccgccatcgcgcgg
gcggcggagggctcggtgcgcgattcgctctccctcctcgaccaggcgatcgcgcacggc
gcgggccgggtcacggccgagaccgtgcgcgacatgctcggcctcgccgaccgggcgcgg
atcatcgacctgttcgaggccgccatgcggggcgacgcgcccgcggccttcgcggaactg
cacggtcagtacgaggccggcgccgatcccgcggtggtgctgcaggacctcgccggcttc
acgcacctcgtcacccgcctgaaggtcgcgcccgagaccgcccgcgccgacaccgccctg
agcgaggccgagcggggccgcggcagcgacttcgcggaccggctctcggtgcgggccctg
tcgcgggcgtggcagatcctgctcagggcgattcccgaggtgcaggcggcgccccgtccc
ctcgcggcggccgagatggcgctggtgcgcctgatctacgccgccgacctgccgaccccg
gacgaggccctgcggcaggtgcgggaaggcggcggcgcggcggtcccgcccgccggccgc
cctctgcccgccgccccgcccggccccgccctgcgcgccctgccggacgcccgccccgcg
caatccgccgcggcggcccgcccggccgccgccccggcgcaggcgcagcacgcggccgag
ccggccctgcggctgcggcgcttcgaggacgtggtggcgctcgcggaggccaagcgcgac
atcggcctcaaggccgccctggagcgcgacgtgcacctcgtgcgcttcgaggagggccgc
atcgagttccgcctcgccgaggcgggccgcccgagcctcgccaacgacctcgcccgcgcc
ctcgacctctggacggggcggcgctgggtggtggccctgtcgcgggagaccggcgaggcg
acgctggcggcccgggccgaggccgcccgcgagagccgccaccagggcgcggcggcgcat
cccctggtgcaggaggtgctgaagcgcttcccgggcgcccagatcgtggatgtgcgggag
aggccgcccgaggcacccgccgaggaattcagccccgaggaattcagcgccccggaggag
ccggaggcggaccagtag
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