Methylobacterium sp. 4-46: M446_4247
Help
Entry
M446_4247 CDS
T00679
Name
(GenBank) helicase, RecD/TraA family
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
met
Methylobacterium sp. 4-46
Pathway
met03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
met00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
M446_4247
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
met03400
]
M446_4247
Enzymes [BR:
met01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
M446_4247
DNA repair and recombination proteins [BR:
met03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
M446_4247
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
UvrD_C_2
OB_YrrC
SH3_13
HHH_5
AAA_11
Viral_helicase1
Helicase_RecD
AAA_22
HHH_2
Transposase_20
HHH_3
HHH
UvrD-helicase
nSTAND3
AAA_29
AAA_16
PIF1
AAA_28
DEAD
LrgB
AAA_23
AAA_18
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
ACA18596
LinkDB
All DBs
Position
4685820..4688030
Genome browser
AA seq
736 aa
AA seq
DB search
MLGSSTSRRPARAGAADAPRDALAGSIERVTFHSAETGFCVLKVKARGRRDLVAVVGHAP
AVAAGEWIAATGAWVSDRQHGLQFRADTLACTPPTGSEGIARYLASGQMRGIGPQMAKRI
VAAFGSETFAVIEANPERLTEVPGIGPTRAARLVAAWAEHRVVREIMVFLHAHGVGTARA
VRIHKTYGAESIAVMSEDPYRLARDVRGIGFRTADAIAARLGLPPTAPARLRAGLAHALQ
AAMDEGHCALPVPDLVARAADLLGVDPGLTRTALAEELGGDAIVADTIGGETHVFLRGLH
AAERAIGERLAALDAAPLPWGEIAVDPALDAVEAETGRRLSPSQREAARTVLSAKVAVIT
GGPGVGKTSTLDALLRLLGGVEAEVLLAAPTGRAAKRMSEQTGRPAKTLHRLLEVDPVRG
GFQRSEHDPLRCDLLVVDEASMIDVPLMNALTRALPRHAALWLVGDVDQLPSVGPGQVLA
DVIASGAVAVARLTEVFRQAAESRIIVNAHRIRAGRMPEGSADASGDFFLVEIEDPEVGA
ERLVEIVTRRIPRRFGLDPVRDVQVLCPMTRGALGSRHLNHALQQVLNPNPPLAVERFGW
RFAPGDRVMVVQNDYDRDVFNGDLGVVARLDPEEGVLIGSFDGREVAWPFDELDALAPAY
AITIHKAQGSEYPAVVIPVALQHYTMLARNLLYTGVTRGKQLVVLVAQRRAVAIAVRGGT
MRPRFTKLREWLRRKT
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgcttggatcctccacctcgcgccggccggcccgggccggcgccgccgacgcgccccgc
gacgccctcgcggggtcgatcgagcgcgtcaccttccacagcgccgagacgggcttctgc
gtcctcaaggtgaaggcccgcgggcggcgcgacctcgtcgcggtggtgggccacgcgccg
gcggtcgcggccggggagtggatcgccgccaccggcgcctgggtcagcgaccgccagcac
gggctgcagttccgcgccgacaccctggcctgcacgcccccgaccgggtcggagggaatc
gcccgctacctcgcctccggccagatgcgcggcatcggcccgcagatggccaagcgcatc
gtcgcggccttcggcagcgagaccttcgcggtgatcgaggcgaaccctgagcgcctcacc
gaggtgccggggatcggcccgacccgggcggcgcggctggtggcggcctgggccgagcac
cgcgtggtgcgggagatcatggtgttcctgcacgcgcacggcgtcggcaccgcgcgggcc
gtgcgcatccacaagacctacggcgccgagtcgatcgccgtgatgagcgaggatccctac
cgcctcgcccgcgacgtgcgcggcatcggcttccggaccgccgacgccatcgccgccagg
ctcggcctgccgccgaccgccccggcgcggctccgggccggcctcgcccacgcgctgcag
gccgcgatggacgagggccattgcgccctgccggtgccggacctcgtggcgcgggcggcc
gacctcctcggcgtcgacccgggcctcacccgcacggcgctcgcggaggagctgggcggc
gacgcgatcgtggcggacacgatcggcggcgagacccacgtcttcctgcgcgggctgcac
gcggccgagcgggcgatcggcgagcgcctcgccgccctcgacgccgcgccgctgccctgg
ggcgagatcgcggtcgacccggccctcgacgccgtcgaggccgagaccgggcgccgcctc
tcgccctcgcagcgcgaggcggcccgcacggtgctctccgccaaggtcgcggtgatcacc
ggggggcccggcgtcggcaagaccagcacgctcgacgcgctgctgcgcctgctcggcggc
gtcgaggccgaggtgctgctcgcggcgccgaccgggcgcgccgccaagcggatgagcgag
cagaccggccggcccgccaagactctgcaccggctcctcgaagtcgatcccgtccgcggc
ggattccagcgctccgagcacgatcccctgcgctgcgacctcctcgtggtggacgaggcc
tcgatgatcgacgtgccgctgatgaacgcgctcacccgggcgctgccccggcacgcggcg
ctctggctcgtcggcgacgtggaccagctgccctccgtcgggccggggcaggtcctggcc
gacgtgatcgcctcgggcgccgtcgcggtggcgcggctcaccgaggtgttccggcaggcg
gcggagagccggatcatcgtcaacgcccaccgcatccgggccgggcggatgccggagggc
agcgccgatgcgtccggggacttcttcctggtcgagatcgaggaccccgaggtcggggcg
gagcggctcgtcgagatcgtgacgcggcgcatcccccgccgcttcggtctcgatccggtg
cgcgacgtgcaggtgctctgcccgatgacccgcggggcgctcggcagccgccacctcaat
cacgccctgcagcaggtgctcaatccgaacccgccgctcgccgtcgagcgcttcggctgg
cgcttcgcgccgggcgaccgggtgatggtggtgcagaacgactacgaccgcgacgtcttc
aacggcgatctcggcgtggtggcgcggctcgatcccgaggagggggtgctgatcgggagc
ttcgacgggcgcgaggtggcgtggcccttcgacgagctcgacgccctcgcgccggcctac
gcgatcacgatccacaaggcgcaagggtcggaatacccggccgtggtgatcccggtggcg
ctgcagcactacacgatgctcgcccgcaacctcctctacacgggcgtgacccgcggcaag
cagctcgtggtgctggtggcgcagaggagggcggtggcgatcgccgtgcggggagggacg
atgcggccgcgcttcacgaagctgcgggagtggctgcgccgaaagacctga
DBGET
integrated database retrieval system
