Methylobacterium sp. 4-46: M446_4510
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Entry
M446_4510 CDS
T00679
Name
(GenBank) excinuclease ABC, B subunit
KO
K03702
excinuclease ABC subunit B
Organism
met
Methylobacterium sp. 4-46
Pathway
met03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
met00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
M446_4510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
met03400
]
M446_4510
DNA repair and recombination proteins [BR:
met03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
M446_4510
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
M446_4510
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
DUF87
SWI2_SNF2
Microtub_bd
UB2H
Kinesin
AAA_16
Motif
Other DBs
NCBI-ProteinID:
ACA18851
LinkDB
All DBs
Position
complement(4966854..4969607)
Genome browser
AA seq
917 aa
AA seq
DB search
MPAPKKPRPSSAKASKPELKPLDPFLAELLNPALNRERLPAPEPQAAPEPGPRRRGRPRK
AEPGFGEAPQAAFAHGAVTDVDPALAKSLGLRTPDDGPDLAEEPGASLAAAGVSATVDAL
TKLLTEGNPLFKDGKPWVPHRPERPQKSEGGVAFRLKSDFSPAGDQPKAIADLVEGVRRS
ERDQVLLGVTGSGKTFTMAKVIEETQRPALILAPNKTLAAQLYGEFKAFFPDNAVEYFVS
YYDYYQPEAYVPRSDTFIEKESSINEQIDRMRHSATRALLERDDVIIVASVSCIYGIGSV
ETYTAMSFTVTLGERIEQRQLIADLVALQYKRIQSDFARGTFRVRGDVIELWPAHLEDRG
WRIGLFGDEVEAITEFDPLTGKTINPLKFVKIYANSHYVTPRPTLQQAVKGIKDELKRRV
EELTRMGRLIEAQRLEQRCTFDLEMIEATGACNGIENYSRYLTGRKPGEPPPTLFEYLPD
NALVFTDESHVTISQIGGMYRGDFRRKATLAEYGFRLPSCLDNRPLRFEEWDAMRPQSIH
VSATPAKWEMEQTGGVFVEQVIRPTGLVDPEVIIRPARSQVDDLLGEVKEVAAAGYRTLV
TTLTKRMAEDLTEYLHENGVRVRYMHSDIDTLERIEIIRDLRLGAFDVLIGINLLREGLD
IPECALVAILDADKEGFLRSETSLIQTIGRAARNAEGRVILYADQRTGSMDRAIAETERR
RAKQLAYNAEHGITPQSVKRNIADILESVFERDHVQVDTGLAKGGVTVGHNLKAVMADLE
KRMRAAAADLDFEEAARLRDELKRLQATELAIAEDPLARQGAVEDQAGRYGEKGGRRRYG
RNADLPPGTGGAEEPLGSGPLGKGVSDEGTRIRRPTLDEMGPGTDREIPIFTERPAARST
QGFPGQRPKYKGRKGRG
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atgcccgccccgaagaaaccgcgcccgtcctcggccaaggcgtcgaagcccgaactgaag
ccgctggaccccttcctcgccgaattgctgaacccggccctcaaccgcgagcggctgccc
gcgccggagccgcaggcggcgccggagcccgggccgcgccggcgcgggcggccccggaag
gccgagcccggattcggcgaggcgccgcaggccgccttcgcgcacggcgccgtgacggat
gtcgatccggccctcgccaagtccctcggcctgcgcacccccgacgacgggccggacctc
gccgaggagccgggcgcctcgctcgccgcggccggggtctcggccacggtcgacgcgctc
accaagctcctcaccgagggcaacccgctgttcaaggacggcaagccctgggtgccgcac
cggccggagcggccgcagaaatccgagggcggcgttgccttccggctgaaatccgatttc
agcccggccggcgaccagcccaaggccatcgccgacctcgtcgagggcgtgcggcgcagc
gagcgcgaccaggtgctgctcggcgtcaccggctccggcaagaccttcacgatggccaag
gtcatcgaggagacccagcgccccgccctcatcctggccccgaacaagacgctcgccgcc
cagctctacggcgagttcaaggccttcttccccgacaacgcggtcgagtacttcgtctcg
tactacgattattatcagcccgaagcctacgtgccgcgctccgacaccttcatcgagaaa
gaatcgtcgatcaacgagcagatcgaccggatgcgccactcggccacgcgggcgctgctg
gagcgcgacgacgtcatcatcgtcgcctcggtctcctgcatctacggcatcggctcggtg
gagacctacacggcgatgtcgttcacggtgacgctgggcgagcgcatcgagcagcgccag
ctcatcgccgacctcgtggccctgcagtacaagcggatccagtccgacttcgcccgcggc
acctttcgggtgcgcggcgacgtgatcgagctctggccggcccacctggaggatcgcggc
tggcgcatcggcctgttcggcgacgaggtcgaggcgatcacggaattcgacccgctcacc
ggcaagaccatcaacccgctgaaattcgtcaagatctacgccaacagccactacgtgacg
ccgcgcccgaccctccagcaggcggtcaagggcatcaaggacgagctgaagcggcgggtc
gaggagctgacccggatgggccggctgatcgaggcgcagcggctggagcagcgctgcacc
ttcgacctggagatgatcgaggcgacgggcgcctgcaacggcatcgagaactactcgcgc
tacctgacgggccgcaagccgggcgagccgcccccgaccctgttcgagtacctgcccgac
aacgccctcgtcttcacggacgagagccacgtcacgatctcgcagatcggcggcatgtac
cggggcgacttccgccgcaaggcgaccctcgccgagtacggcttccgcctgccctcctgc
ctcgacaaccggccgctgcgcttcgaggaatgggacgcgatgcggccgcaatcgatccac
gtctcggcgacgccggccaagtgggagatggagcagaccggcggcgtcttcgtcgagcag
gtcatccgcccgaccggcctcgtcgacccggaggtgatcatccgcccggcccgctcccag
gtggacgacctgctcggggaggtgaaggaggtcgccgccgcgggctaccggaccctggtc
accacgctcaccaagcgcatggccgaggacctgaccgagtacctgcacgagaacggggtg
cgggtgcgctacatgcactcggacatcgacacgctggagcggatcgagatcatccgcgac
ctgcggctcggcgccttcgacgtgctgatcggcatcaacctgctgcgcgaggggctcgac
atcccggaatgcgcgctggtcgcgatcctggacgcggacaaggaggggttcctgcgctcc
gagacctcgctgatccagacgatcggccgcgcggcccgcaacgcagaggggcgggtgatc
ctctacgcggaccagcgcaccggctcgatggaccgggccatcgccgagaccgagcggcgc
cgggccaagcagctcgcctacaatgccgagcacggcatcacgccccagagcgtgaagcgc
aacatcgccgacatcctggagagcgtcttcgagcgcgaccacgtccaggtggacacggga
ctggccaagggcggcgtcacggtcggccacaacctcaaggccgtgatggcggatctggag
aagcgcatgcgcgcggccgccgccgacctcgacttcgaggaggcggcgcggctgcgcgac
gagctcaagcggctccaggcgacggaactcgccatcgcggaggacccgctggcccgccag
ggggcggtggaggaccaggccgggcgctacggcgagaagggcgggcggcgccgctacggc
cgcaacgccgacctgccgccgggcactggcggggcggaggagccgctcgggtccgggccg
ctgggcaagggcgtgtcggacgagggcacccgcatccgcaggccgaccctcgacgagatg
gggccggggaccgaccgggagatcccgatcttcaccgagcggccggcggcgcgctcgacg
cagggcttcccggggcagcggccgaaatacaagggccgcaaggggcggggctga
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integrated database retrieval system
