Methylobacterium sp. 4-46: M446_5454
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Entry
M446_5454 CDS
T00679
Name
(GenBank) deoxyribodipyrimidine photolyase-related protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
met
Methylobacterium sp. 4-46
Brite
KEGG Orthology (KO) [BR:
met00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
met03400
]
M446_5454
Enzymes [BR:
met01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
M446_5454
DNA repair and recombination proteins [BR:
met03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
M446_5454
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Polysacc_synt_2
PELOTA_1
Motif
Other DBs
NCBI-ProteinID:
ACA19770
LinkDB
All DBs
Position
complement(5985506..5987107)
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AA seq
533 aa
AA seq
DB search
MRTLRFVLGDQLHPRLAGLTDLDPARDVVLMAEVAEEATYVRHHKQKIALVLSAMRHFAA
ELRARGVAVDYVALEDAGNTGSFGGELARAVARHRPDRVVVTEPGEWRVLAMMRDWSETL
GVPVEIRADIRFLCPREAFARWAEGRASLRMETFYRAMRRRTGFLMRDGAPVGGRWNFDQ
ENRRKLPADHRLPARLRFPPDAVTREVIALVARRFPGHFGDLDGFGWPVTREQALAALRH
FLDECLPAFGDYQDAMRAGAPFLYHALLAPALNLGLLDAEEVCRAAERAHAEGRAPLNAV
EGFIRQILGWREYVRGLYWARMPDYAATNALGAARDLPWFYWSGETAMRCLADSVAATRA
HAHAHHIQRLMVLGNFALLAGIRPAALEEWFLVVYADAYEWVELPNVHGMALWADGGLLA
SKPYAASGAYIDRMSDYCRACAYDVRLKSGTRACPFNYLYWAFLITHAERLSGNPRLAMP
YRTLARMPASRRREILADAARFLAGLDGSEGQPQAGRQEEAGTPDLFLVEPSG
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
gtgcggacgctgcgcttcgtgctgggcgaccagctccacccgcgcctcgccggcctgacc
gaccttgacccggcccgcgacgtggtgctgatggccgaagtcgccgaggaggcgacctat
gtccgtcaccacaagcagaagatcgcgctcgtcctctcggccatgcgccacttcgcggcg
gagctgagggcgcgcggcgtcgcggtcgactacgtggcgctggaggatgcgggcaatacc
ggctccttcggtggggaactcgcccgcgcggtcgcccgccaccggcccgaccgggtggtg
gtgaccgagcccggcgagtggcgggtgctcgcgatgatgcgggattggtcggagacgctc
ggcgttccggtcgagatccgcgccgacatccgcttcctctgcccgcgcgaggccttcgcg
cgctgggcggaggggcgcgcgagcctgcgcatggagaccttctaccgggcgatgcgccgc
cggaccggcttcctgatgcgggacggcgccccggtcggcgggcgctggaacttcgaccag
gagaaccgccgcaagcttccggccgatcaccgcctccccgcgcgcctgcgcttcccgccc
gacgcggtcacccgggaggtgatcgccctcgtggcccggcgcttccccgggcatttcggc
gatctcgacgggttcggctggccggtgacgcgggagcaggccctggcggccctgcgccac
ttcctggacgagtgcctgcccgccttcggcgactaccaggacgcgatgcgggcgggcgcc
cccttcctctaccacgcgctgctcgcgcccgccctcaatctcggcctcctcgacgccgag
gaggtctgccgggcggcggagcgcgcccacgcggaggggcgcgcgcccctcaacgcggtc
gagggcttcatccgccagatcctcggctggcgggaatacgtgcgcggcctctactgggcg
aggatgccggattacgcggccaccaacgccctcggggcggcgcgcgacctgccctggttc
tactggtcgggcgagacggcgatgcgctgcctcgccgacagcgtcgcggcgacgcgggcc
cacgcccacgcccaccacatccagcgcctgatggtgctcggcaacttcgccctcctcgcc
gggatccggcccgccgcgctggaggagtggttcctggtcgtctacgcggatgcctacgag
tgggtggaactcccgaacgtccacggcatggcgctgtgggcggacgggggcctgctcgcc
tccaagccctacgcggcctccggcgcctacatcgaccgcatgtcggattactgccgcgcc
tgcgcgtacgacgtgcggctgaagagcgggacgcgggcctgccccttcaactacctctac
tgggccttcctgatcacccacgcggagcggctctcgggcaacccgcgcctcgccatgccc
taccgcaccctcgcgcggatgcccgcctcccgccgccgggagatcctggccgatgccgcg
cgcttcctcgcggggctcgacgggtcagaggggcagccacaggcaggtcgccaggaagag
gccgggacgccggaccttttcctcgtagagccatccggctga
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