Methylobacterium sp. 4-46: M446_5463
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Entry
M446_5463 CDS
T00679
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
met
Methylobacterium sp. 4-46
Pathway
met03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
met00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
M446_5463
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
met03019
]
M446_5463
03110 Chaperones and folding catalysts [BR:
met03110
]
M446_5463
03029 Mitochondrial biogenesis [BR:
met03029
]
M446_5463
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
met04147
]
M446_5463
Enzymes [BR:
met01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
M446_5463
Messenger RNA biogenesis [BR:
met03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
M446_5463
Chaperones and folding catalysts [BR:
met03110
]
Heat shock proteins
HSP60 / Chaperonin
M446_5463
Mitochondrial biogenesis [BR:
met03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
M446_5463
Exosome [BR:
met04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
M446_5463
Exosomal proteins of other body fluids (saliva and urine)
M446_5463
Exosomal proteins of breast cancer cells
M446_5463
Exosomal proteins of colorectal cancer cells
M446_5463
Exosomal proteins of bladder cancer cells
M446_5463
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
ACA19779
LinkDB
All DBs
Position
complement(5994923..5996578)
Genome browser
AA seq
551 aa
AA seq
DB search
MAAKDVRFSADAREKMLRGVDILANAVKVTLGPKGRNVVIEKSFGAPRITKDGVTVAKEI
ELADKFENMGAQMVREVASKTNDLAGDGTTTATVLAQAIVKEGAKYVAAGMNPMDLKRGI
DLAVAAVVEDLKQNSRKITRNDEIAQIGTISANGDAEIGRMLAEAMQKVGNEGVITVEEA
KTAETELDVVEGMQFDRGYLSPYFITNAEKMIAELEDPYILIHEKKLSSLQAMLPVLEAV
VQTGKPLLIVAEDIEGEALATLVVNKLRGGLKVAAVKAPGFGDRRKAMLEDIAILTAGQM
IAEDLGIKLENVTLPMLGRAKRVRIEKENTTIIDGAGEKADIEARVAQIKAQIEETTSDY
DREKLQERLAKLAGGVAVIRVGGATEVEVKEKKDRVDDAMHATRAAVEEGIVPGGGAALL
RAKAAAQGVKSDNPDVQAGINIVVRALEAPIRQIAENAGVEGSIVVGKVAENGSATFGFD
AQNETYVDLIQAGIVDPVKVVRTALQDAASVAGLLVTTEAMVADAPKKEAPPAMPGGGGM
GGMGGMGGMDF
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggcagccaaagacgttcgtttctccgccgatgcccgcgagaagatgctgcgcggcgtc
gacatcctggccaacgccgtcaaggtgacgctcggcccgaagggccgcaacgtggtgatc
gagaagagcttcggggctccgcggatcaccaaggacggcgtgacggtcgccaaggagatc
gagctcgccgacaagttcgagaacatgggcgcccagatggtgcgcgaagtggcctcgaag
accaacgacctcgcgggtgacggcaccaccacggcgaccgtgctggcccaggccatcgtc
aaggaaggcgccaagtacgtcgccgccggcatgaacccgatggacctcaagcgcggcatc
gacctcgccgtcgccgccgtcgtcgaggacctgaagcagaactcccgcaagatcacccgc
aacgacgagatcgcccagatcggcaccatctcggccaacggcgacgcggagatcggccgc
atgctcgccgaggcgatgcagaaggtcggcaacgagggcgtgatcacggtcgaggaggcc
aagacggccgagaccgagctcgacgtcgtcgagggcatgcagttcgaccgcggctacctc
tccccgtacttcatcacgaacgcggagaagatgatcgccgagctcgaggatccctacatc
ctgatccacgagaagaagctgtcgtcgctgcaggcgatgctgccggtgctcgaggcggtg
gtgcagaccggcaagccgctgctgatcgtggccgaggacatcgagggcgaggcgctggcc
acgctggtggtcaacaagctgcgcggcggtctgaaggtggcggccgtgaaggcgccgggc
ttcggcgaccggcgcaaggcgatgctggaggacatcgcgatcctgaccgccggtcagatg
atcgcggaggatctcggcatcaagctggagaacgtgacgcttccgatgctcgggcgggcc
aagcgggtgcggatcgagaaggagaacaccacgatcatcgatggggccggggagaaggcg
gacatcgaggcgcgggtggcgcagatcaaggcgcagatcgaggagacgacctcggactac
gaccgggagaagctgcaggagcgcctggcgaagctggccgggggcgtggcggtgatccgg
gtcggcggcgcgaccgaggtcgaggtcaaggagaagaaggaccgcgtcgacgacgccatg
cacgcgacccgcgcggccgtggaggagggcatcgtcccgggcggcggcgccgccctcctg
cgcgccaaggccgcggcccagggcgtgaagagcgacaaccccgacgtccaggccggcatc
aacatcgtggtgcgggcccttgaggccccgatccgccagatcgccgagaatgccggcgtc
gagggctcgatcgtggtcggcaaggtcgccgagaacggctcggccaccttcggcttcgac
gcgcagaacgagacctacgtcgacctgatccaggccggcatcgtcgaccccgtcaaggtc
gtgcgcaccgccctgcaggacgctgcctcggtggccggcctgctggtgacgaccgaggcg
atggtcgccgacgcgcccaagaaggaggccccgccggccatgccgggcggcggcggcatg
ggcggcatgggcggcatgggcggcatggatttctga
DBGET
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