Methylobacterium sp. 4-46: M446_5992
Help
Entry
M446_5992 CDS
T00679
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
met
Methylobacterium sp. 4-46
Pathway
met03030
DNA replication
met03430
Mismatch repair
met03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
met00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
M446_5992
03430 Mismatch repair
M446_5992
03440 Homologous recombination
M446_5992
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
met03032
]
M446_5992
03400 DNA repair and recombination proteins [BR:
met03400
]
M446_5992
Enzymes [BR:
met01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
M446_5992
DNA replication proteins [BR:
met03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
M446_5992
DNA repair and recombination proteins [BR:
met03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
M446_5992
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
T2SSK
DUF1707
HROB
Motif
Other DBs
NCBI-ProteinID:
ACA20269
LinkDB
All DBs
Position
complement(6578923..6582429)
Genome browser
AA seq
1168 aa
AA seq
DB search
MRVLKDVGFVHLHTHSSYSLLEGALKLGDLVKAAAGDRQPALALTDTNNLFGALEFSEKA
AGLGIQPIAGIQLSVLFEAPEPGQRGGPAPLPHLVLLAKDETGYGHLLKLASLAYFDGPL
GEAPRVPVEALRDCAPGLIALTGGPGGPLDSCLRAARPEHAAGRLARLVEAFGEDHLYVE
IQRHGLPDERAVEAELIGLADRHGLPLVATNEPFFARPEDYEAHDALLAIAEGRLVSDEK
RRRLTPRHDFKTRAAMAELFRDLPDALAASVEIAMRCAYRVRTRKPILPSFGVSGGPAAR
DAAQAGSPAPAGDPALDEAGELKRQAEAGLARRLAEAGPAEGLSEQDYRDRLAYEIGIIT
KMKFPGYFLIVSDFIKWAKANDIPVGPGRGSGAGSLVAWSLLITDLDPLRFGLLFERFLN
PERVSMPDFDIDFCVVGRERVIEYVQSRYGEAQVAQIITFGTLLARGVLRDVGRVLEMPY
GQVDKLTKLVPQNPANPVTLVQAIEGEPRLQSAMEEEPVVARLMEIAKKLEGLHRHASTH
AAGVVIGDRPLEALVPLYRDPKTGMRVTQFNMKWVEQAGLVKFDFLGLKTLTVLRGATDL
LEQRGITLDLAALPLDDERTYERLRKGEVVGVFQVESAGMRKALVEMCADRFEDLIALVA
LYRPGPMANIPVYCERKLGRDAGNEAVWYPHPKLEPILAETFGIIVYQEQVMEVAKVLAG
YSLGDADLLRRAMGKKIKAEMDAQRDRFLKGAMERGLDKAKANEIFDLLAKFADYGFNKS
HAAAYALITYQTAYLKANYPVEFLAASMSQDLDDTDKLAELRQDAQRLAIKVEPPSVNRS
GVTFEVHDGTIRYALAAIKGVGRAAVEAIVQARGDRPFRDLGDFARRLNPRLVNKRTLES
LVGAGALDEIEPDRARAFAAIEPMLRLAQGALEAETVGMTDMFGGVAAATVALRIPPYDP
WPAADRLKKEYEAVGFFLSGHPLDEYGELLKKLRVQTWVEFCRSVRAGNSVGRVAATVLD
RSERRTKTGNKLGIVNLSDQTGHFEAIVFSEGLQQYRELLEPGRALALQLQASAEGEDVR
ARIQTCEPLDQAVARYQKGMRIYLRDERPIPSVQQRLTTRGEGEVSLILILDGGEREVEV
KLRDRYQASPQIAGALRAVPGVVQVEVN
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
gtgcgggttctcaaggacgtcggcttcgttcacctccacacccattcctcctactcgctg
ctggagggggcgctgaagctcggcgacctcgtcaaggcggcggccggcgaccgccagccg
gcgctggcgctcaccgacaccaacaacctgttcggggcgctggaattctccgagaaggcg
gccggcctcggcatccagccgatcgccgggatccagctctcggtgctgttcgaggcgccc
gagcccggccagcgcggcgggcccgcgcccctgccccacctcgtgctgctcgccaaggac
gagaccggctacggccacctcctgaagctcgcgagcctcgcctatttcgacggtcccctc
ggcgaggcgccccgggtcccggtcgaggccctgcgggattgcgcgccggggctgatcgcg
ctcaccggcgggcccggcggcccgctcgattcctgcctgcgggcggcgcggccggagcac
gcggcgggccgcctcgcgcggctcgtcgaggccttcggggaggatcacctctacgtcgag
atccagcgccacggcctgcccgacgagcgggcggtcgaggccgagctgatcggcctcgcc
gaccgccacggcctgcccctggtcgccaccaacgagccgttcttcgcgcgtcccgaggat
tacgaggcgcacgacgcgctcctcgccatcgcggagggccgcctcgtctcggacgagaag
cgccgccggctcacgccgcgccacgatttcaagacccgcgcggccatggccgagctcttc
cgcgacctgccggacgcgctcgcggcgagcgtcgagatcgcgatgcgctgcgcctaccgg
gtgcgcacccgcaagccgatcctgccgagcttcggggtgagcggcgggccggcggcgagg
gatgccgcgcaggcgggctcccccgccccggcgggcgatcccgccctcgacgaggcgggg
gagctgaagcggcaggcggaggccgggctggcgcgccgcctcgccgaggccggccccgcc
gaggggctgagcgagcaggattaccgggaccggctcgcctacgagatcggcatcatcacc
aagatgaagttcccgggctacttcctgatcgtctcggacttcatcaagtgggccaaggcc
aacgacatccccgtcgggcccggccgcggctcgggcgcgggctcgctggtggcgtggtcg
ctcctcatcaccgacctcgacccgctccgcttcggcctgctgttcgagcgcttcctcaac
cccgagcgcgtctcgatgccggatttcgacatcgacttctgcgtcgtcgggcgcgagcgg
gtgatcgagtacgtgcagagccgctacggcgaggcccaggtcgcgcagatcatcaccttc
ggcacgctgctcgcccgcggcgtgctgcgcgacgtcggccgcgtgctggagatgccctac
gggcaggtcgacaagctcaccaagctggtgccgcagaacccggcgaacccggtgaccctc
gtccaggccatcgagggcgagccgcggctgcagagcgccatggaggaggagccggtcgtc
gcccggctcatggagatcgccaagaagctggagggcctgcaccgccacgcctcgacccac
gcggccggcgtggtgatcggcgaccggccgctcgaggcgctggtgccgctctaccgcgac
ccgaagaccggcatgcgggtcacccagttcaacatgaagtgggtggagcaggccggcctc
gtgaagttcgacttcctcggcctcaagaccctgacggtgctgcgcggcgccaccgacctg
ctcgagcagcgcggcatcaccctcgacctcgcggccctgcccctcgacgacgagcgcacc
tacgagcgcctgcgcaagggcgaggtggtcggcgtgttccaggtggaatcggcgggcatg
cgcaaggcgctcgtcgagatgtgcgccgaccgcttcgaggacctgatcgcgctcgtcgcc
ctctaccggccgggcccgatggccaacatcccggtctattgcgagcgcaagctcgggcgc
gacgccggcaacgaggcggtctggtacccccatcccaagctggagccgatcctggccgag
accttcggcatcatcgtctaccaggagcaggtgatggaggtcgccaaggtgctcgccggc
tactcgctcggcgacgccgacctcctgcgccgcgccatgggcaagaagatcaaggccgag
atggacgcccagcgcgaccgcttcctcaagggggcgatggagcgcggcctcgacaaggcc
aaggccaacgagatcttcgacctgctggccaagttcgcggattacggcttcaacaagtcg
cacgcggccgcctacgcgctgatcacctaccagaccgcctacctgaaggcgaactacccg
gtcgagttcctggccgcctcgatgtcccaggacctcgacgacaccgacaagctcgccgag
ttgcgccaggacgcgcagcgcctggcgatcaaggtcgagcccccgtcggtgaaccgctcc
ggcgtcaccttcgaggtgcatgacgggacgatccgctacgcgctcgcggcgatcaagggc
gtggggcgggccgcggtcgaggcgatcgtgcaggcgcggggcgaccggcccttccgcgac
ctcggcgacttcgcccgccgcctcaacccgcggctggtcaacaagcgcacgctggagagc
ctcgtcggcgcgggcgccctcgacgagatcgagcccgaccgggcgcgggccttcgcggcg
atcgagccgatgctgcgcctggcgcagggcgcgctcgaggccgagacggtcgggatgacc
gacatgttcgggggcgtcgccgccgccacggtggcgctgcgcatcccgccctacgatccc
tggccggccgccgaccggctcaagaaggagtacgaggcggtcggcttcttcctgtcgggc
cacccgctcgacgagtacggggagctcctcaagaagctgcgcgtccagacctgggtcgag
ttctgccgctcggtgcgggccggcaacagcgtcggccgggtcgccgccacggtgctcgac
cgctcggagcggcgcaccaagaccggcaacaagctcggcatcgtcaacctctcggaccag
accgggcatttcgaggcgatcgtgttctcggaggggctgcagcaataccgcgaattgctg
gaacccgggcgggcgctcgccctccagctccaggcgagtgccgagggcgaggacgtgcgc
gcccgcatccagacctgcgagcccctcgaccaggcggtggcccgctaccagaagggcatg
cggatctacctgcgcgacgagcgcccgatcccgagcgtgcagcagcggctcaccacccgc
ggcgagggcgaggtctcgctgatcctgatcctcgacgggggcgagcgcgaggtcgaggtg
aagctgagggaccgctaccaggcgagcccgcagatcgccggcgcgctccgggcggtgccg
ggggtggtgcaggtcgaggtgaattga
DBGET
integrated database retrieval system
