Methylobacterium sp. 4-46: M446_6254
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Entry
M446_6254 CDS
T00679
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
met
Methylobacterium sp. 4-46
Pathway
met03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
met00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
M446_6254
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
met03400
]
M446_6254
Enzymes [BR:
met01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
M446_6254
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
M446_6254
DNA repair and recombination proteins [BR:
met03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
M446_6254
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
ACA20520
UniProt:
B0UR68
LinkDB
All DBs
Position
6873185..6874078
Genome browser
AA seq
297 aa
AA seq
DB search
MPELPEVETVRRGLEPALVGARFTTVHLARPDLRFPLPARFAARLTGQRVEALSRRAKYL
VADLSSGDALIMHLGMSGRFDVVFPDGRQLSPGEFYLEGAPGQAKHDHVVFALSNGARVT
YNDVRRFGFMDLVRRAELETCRHFAGMGIEPLGSDLSGEAVARLFRGRRTPLKAALLDQR
LIAGLGNIYVCEALHRARLHPEAAAGTLADAAGRPTRAAARLAQVIRDVLTEAVAAGGST
LRDYAHTDGTQGAFQHRFRVYDREGLACTARGCRGRVRRIVQAGRSTFYCETCQPAP
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaactgcccgaagtcgagaccgtgcgccggggcctcgaacccgccctcgtcggc
gcgcgcttcacgacggtccacctcgcccgccccgacctgcgctttccgctgcccgcgcgc
ttcgccgcgcgcctcaccggccagcgggtcgaggccctgtcgcggcgcgccaagtacctc
gtggccgacctctcctcgggcgacgcgctgatcatgcatctgggcatgagcgggcgcttc
gacgtcgtgttcccggacgggcgccagctctccccgggcgagttctacctcgaaggcgcc
ccgggccaggccaagcacgaccacgtcgtcttcgcgctctcgaacggggcgcgggtgacc
tacaacgacgtgcgccgcttcggcttcatggacctcgtgcggcgggcggagctggagacc
tgccgccacttcgccgggatggggatcgagccgctcggcagcgacctctcgggcgaggcg
gtggcgcggctgttccggggccggcgcacgcccctcaaggccgcgctcctcgaccagcgg
ctgatcgccggcctcggcaacatctacgtctgcgaggcgctgcaccgcgcccggctgcat
cccgaggccgcggccggcaccctggccgacgcggcgggccggcccacccgcgccgccgcc
cgcctcgcccaggtgatccgcgacgtgctgaccgaggccgtcgcggccggcggctcgacg
ttgcgcgactacgcgcacacggacggcacccagggggccttccagcaccggttccgcgtc
tacgaccgggaggggctcgcctgcacggcgcggggctgccggggcagggtgcggcggatc
gtgcaggcgggccgctcgaccttctactgcgagacctgccagccggcgccctga
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