Methylobacterium sp. 4-46: M446_6363
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Entry
M446_6363 CDS
T00679
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
met
Methylobacterium sp. 4-46
Brite
KEGG Orthology (KO) [BR:
met00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
met03400
]
M446_6363
Enzymes [BR:
met01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
M446_6363
DNA repair and recombination proteins [BR:
met03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
M446_6363
Prokaryotic type
M446_6363
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
FAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
ACA20627
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Position
6991192..6992589
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AA seq
465 aa
AA seq
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MAGEGPIEAARIRALNQAPPRQGRYVLYLMQQAMRSRDNPALEHAIDEANRLGLPVVVGF
GLLDGGRTFPEANARHYAFLLQGLAAARAGVERRGIAFVLRRSTPAAAALALGAEAALAV
LDRGYLTVQRAWSAEIARGLACPVVQVEGDVVVPVETASDKHEFAARTLRPKLQRLWDSY
LAPLRARRVAHAADGLALASDLDVSDPEAALAALTLDRAVRPVRRFRGGEDEAMARLDAY
LAGPFAQYGTVRNRPEAGAASHMSPYLHFGQISPVAIALKVRAAAAGGPEDKASYLEELI
VRRELAMNHVHYQPGYDRYESAVPDWARRALAEHAGDRRDPLYDEAALEEGRTHDRHWNA
AMREMRETGYMHNHLRMYWGKKILEWSPSPEEGFRRTLRLNNRYFLDGRDPNSFTNVAWI
YGLHDRPWGRRPIFGTVRYLGPNTLRKFDAAGYLRSVEALCAAEA
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcgaggggccgatcgaggcggcgcggatccgcgcgctcaaccaggcgccgccg
cggcaggggcgctacgtgctctacctgatgcagcaggcgatgcgcagccgcgacaacccg
gccctcgaacacgcgatcgacgaggcgaaccgcctcggcctgcccgtggtggtggggttc
ggcctcctcgacggcggccggaccttcccggaggcgaatgcccgccactacgccttcctg
ctgcaggggctcgccgccgccagggccggggtggagcggcgcggcatcgccttcgtgctg
cgccgctccaccccggcggcggcggccctggcgctgggcgccgaggcggccctggcggtg
ctcgaccgcggctacctcacggtgcagagggcgtggagcgccgagatcgcccggggcctc
gcctgcccggtggtgcaggtcgagggcgacgtggtggtcccggtcgagaccgcctcggac
aagcacgaattcgccgcccgcaccctgcgcccgaagctgcagcggctctgggactcctac
ctcgcgcccctgcgcgcccgcagggtggcgcacgcggcggacgggctcgccctggcgagc
gacctcgacgtctcggacccggaggcggcgctcgccgccctgaccctcgaccgcgccgtg
cgcccggtgcggcgcttccgcggcggggaggacgaggcgatggcccggctcgacgcctac
ctcgccgggcccttcgcgcagtacggcacggtccgcaaccggcccgaggcgggggcggcc
tcgcacatgagcccctacctgcatttcggccagatctcgccggtggcgatcgccctgaag
gtgcgggcggccgcggccggcggcccggaggacaaggcctcctacctggaggaactgatc
gtccggcgcgaactggcgatgaaccacgtccactaccagccgggctacgaccgctacgag
tcggccgtgccggactgggcgcgcagggccctggccgagcacgcgggcgaccgccgcgac
ccgctctacgacgaggccgcgctggaggagggccgcacccacgaccgccactggaacgcg
gcgatgcgggagatgcgcgagaccggctacatgcacaaccacctgcgcatgtactggggc
aagaagatcctcgaatggtccccctcgcccgaggaggggttccggcgcaccctgcggctc
aacaaccgctacttcctggacgggcgcgacccgaattccttcaccaacgtggcctggatc
tacggcctgcacgaccggccctggggccggcgcccgatcttcggcaccgtgcgctatctc
ggccccaacacgctgaggaagttcgacgccgcgggctaccttcgcagcgtcgaggcgctc
tgcgccgcggaggcgtga
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