Methylobacterium sp. 4-46: M446_6826
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Entry
M446_6826 CDS
T00679
Name
(GenBank) AAA family ATPase, CDC48 subfamily
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
met
Methylobacterium sp. 4-46
Pathway
met04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
met00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
M446_6826
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
met03019
]
M446_6826
03009 Ribosome biogenesis [BR:
met03009
]
M446_6826
04131 Membrane trafficking [BR:
met04131
]
M446_6826
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
met04147
]
M446_6826
Messenger RNA biogenesis [BR:
met03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
M446_6826
Ribosome biogenesis [BR:
met03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
M446_6826
Membrane trafficking [BR:
met04131
]
SNARE
SNARE associated proteins
Others
M446_6826
Autophagy
Aggrephagy
Other aggrephagy associated proteins
M446_6826
Exosome [BR:
met04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
M446_6826
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
AAA_5
CDC48_2
AAA_22
AAA_2
IstB_IS21
AAA_14
AAA_33
TIP49
AAA_28
nSTAND3
RNA_helicase
DUF815
Mg_chelatase
NPHP3_N
AAA_7
AAA_3
AAA_18
ABC_tran
AAA_25
AAA_24
AAA_17
PhoH
AAA_30
Vps4_C
TsaE
Sigma54_activat
Parvo_NS1
bpMoxR
SLFN-g3_helicase
ATPase_2
Zeta_toxin
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
ACA21071
LinkDB
All DBs
Position
complement(7523528..7525801)
Genome browser
AA seq
757 aa
AA seq
DB search
MAEDTGSVRAQVANARAQDVGRGVARVGAAVLRSLHLQEGDPIEIVGKRHTTALAIALGA
EDEGLSIIRLDGLQRVNAGVSSGDHVEIKRAEVRPANRVVLAPAQKNLRLQGSAEALRRT
FFRRPLMAGDVISTSVQSRMGHDDVPPELRSMFNLPAYGLQEIRLVVVSTQPRGIVQVTA
ETEIDLRPIYEEPKEARRADVTYDDIGGLGSTVDQVREMVELPLRHPELFQRLGIDPPKG
VLLYGPPGTGKTLLARAVANETEAQFFHIAGPEIMGSQYGESEQRLRQIFSDAQRNSPAI
IFIDEIDSIAPKREEARGEVERRIVAQLLTLMDGLEPRQNIVVIGATNRRDAIDEALRRP
GRFDREIVIGVPDEPGRREVLTIHTRGMPLGDTVDLDEIARTTYGFVGADLAALAREAAM
DALRRVLPQINLKEGIPPEILETLQVCREDFLNALKRVQPSALREIMIQVPNVGWDDVGG
LGDVQTRLREGVELPLKNPEAFRRIGIRPAKGFLLFGPPGTGKTLLAKAVAREASANFVA
TKSSDLLSKWYGESEQQVSRLFARARQVAPTVIFIDEIDSLAPVRGGGLGEPAVTERVVN
TILAEMDGLEELQGVVVIAATNRPNLVDPALLRPGRFDELVYVPVPSAEGRRHILGIHTR
GMPLARDVDLDDLAARTVRFTGADLEDLTRRAGLMALRADLAASEVTRAHFEAALHETRP
SVTPEMEQDYETMLRTLKQEGPQRQPIGFMPIRQAAE
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagacacgggcagcgtgcgcgcgcaggtggcgaatgcgcgggcgcaggatgtg
gggcgcggtgtcgcccgggtgggcgcggcggttctccgcagcctgcacctgcaggagggc
gacccgatcgagatcgtcggcaagcgccacaccacggcgctcgccatcgccctcggcgcc
gaggacgagggcctcagcatcatccgcctcgacggcctccagcgcgtcaatgcgggggtg
agctcgggcgaccacgtcgagatcaagcgcgccgaggtgcggcccgcgaaccgcgtcgtg
ctcgccccggcccagaagaacctgcgcctgcagggctcggccgaggccctgcgccgcacc
ttcttccggcggccgctgatggccggggacgtgatctcgacctcggtgcagtcgcggatg
ggccacgacgacgtgccgcccgagctgcgctcgatgttcaacctgccggcctacggcctt
caggagatccgcctggtcgtggtctcgacccagccgcgcggcatcgtgcaggtcacggcc
gagaccgagatcgacctgcggccgatctacgaggagcccaaggaggcgcggcgcgccgac
gtcacctacgacgacatcggcgggctcggcagcaccgtcgaccaggtgcgcgagatggtg
gagctgccgctgcgccaccccgagctgtttcagcgtctcggcatcgacccgcccaagggc
gtgctcctctacggcccgcccggcaccggcaagaccctgctcgcccgcgcggtcgccaac
gagaccgaggcgcagttcttccacatcgccggcccggagatcatgggcagccagtacggg
gaatccgagcagcgcctgcgccagatcttctccgacgcgcagcgcaattcgcccgcgatc
atcttcatcgacgagatcgactcgatcgcgccgaagcgcgaggaggcccgcggcgaggtg
gagcgccgcatcgtcgcccagctcctcaccctgatggacgggctggagccgcgccagaac
atcgtggtgatcggggcgacgaaccggcgcgacgcgatcgacgaggccctgcgccggccc
ggccgcttcgaccgcgagatcgtgatcggcgtgcccgacgagccgggccggcgcgaggtg
ctgaccatccacacccgcggcatgccgctcggcgacaccgtcgacctcgacgagatcgcc
cgcaccacctacggcttcgtgggggccgacctcgcggcgctcgcccgcgaggcggccatg
gacgcgctgcggcgcgtgctgccgcagatcaacctgaaggaggggatcccgccggagatc
ctcgagaccctgcaggtctgccgcgaggatttcctcaacgccctcaagcgggtccagccc
tcggcgctgcgcgagatcatgatccaggtgccgaatgtcggctgggacgacgtcggcggg
ctcggcgacgtccagacccgcctgcgcgagggcgtggaactgcccctcaagaacccggag
gcgttccggcgcatcggcatccggccggccaagggcttcctgctgttcgggccgcccggc
accggcaagacgctgctcgccaaggcggtggcgcgggaggcctcggcgaatttcgtggcg
acgaagtcctcggacctgctctcgaaatggtacggcgaatccgagcagcaggtctcgcgc
ctgttcgcccgggcccggcaggtcgccccgaccgtgatcttcatcgacgagatcgactcg
ctcgcgccggtgcgcggcggcggcctcggcgagcccgccgtgaccgagcgggtggtcaac
acgatcctggccgagatggacgggctggaggagctgcagggcgtggtggtgatcgccgcc
accaaccggccgaacctggtcgatccggccctgctgcggccgggccgcttcgacgaactc
gtctacgtgccggtgccgagcgcggagggccgccgccacatcctgggcatccacacccgc
gggatgccgctcgcccgcgacgtcgacctcgacgacctcgcggcccgcaccgtgcgcttc
accggggcggacctggaggacctcacccgccgggccggcctgatggcgctgcgggcggac
ctcgcggcgagcgaggtgacgcgggcgcatttcgaggccgcgctgcacgagacgcgcccc
tcggtgacgcccgagatggagcaggattacgagacgatgctgcgcaccctcaagcaggag
ggaccgcagcgccagccgatcgggttcatgccgatccggcaggcggccgagtga
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