KEGG   Methylobacterium sp. AMS5: Y590_02305
Entry
Y590_02305        CDS       T04283                                 
Name
(GenBank) Ffh, signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
meta  Methylobacterium sp. AMS5
Pathway
meta02024  Quorum sensing
meta03060  Protein export
meta03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:meta00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    Y590_02305
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Y590_02305
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Y590_02305
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:meta02044]
    Y590_02305
Enzymes [BR:meta01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     Y590_02305
Secretion system [BR:meta02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   Y590_02305
  Eukaryotic Sec-SRP protein
   Y590_02305
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N CbiA Zeta_toxin AAA_33 AAA_22 AAA_16 Thymidylate_kin 6PF2K AAA_19 DnaB_C APS_kinase AAA_31 AAA TctA AAA_14 ResIII ArsA_ATPase AAA_5 AAA_17 NACHT ABC_tran AAA_18 AAA_7 ATPase_2
Other DBs
NCBI-ProteinID: AMB43713
LinkDB
Position
467499..469061
AA seq 520 aa
MFEGLSDRLSGILSGLTRRGALTEADVTAAMREVRRALLEADVALEVVRSFTDKVREKAV
GAVVLKSVTPGQMVVKIVNDELIAMLGTDASVVDLNAPAPVAILMVGLQGSGKTTTTAKI
ARRLNQRDKRRVLLASLDTRRPAAMEQLAVLAKQVEVESLPIVAGQSAVQIAKRAMEAAR
LGGFDVVMLDTAGRTTVDEGLMNEAAEVKAATRPHEVLLVADALTGQDAVNTARAFDERL
GVTGIVLTRMDGDSRGGAALSMRAVTGKPIKLVGVGEKVDALEEFHPQRVANRILGMGDI
VSLVEKAAETIDHEQALRTAEKMRKGKFDLEDLSMQLAQMEKMGGIGGLMGMLPGMGQMK
KQVEGANLDEKMFKRQRAIISSMTPAERKNPDLLKNSRKKRIAAGAGVKVEEINKLLKMH
RTMADMMKAMGSGKRGGIGQALGNMFGLGGGMPGGLPGGMKLPPGMPEPTPEQIAEIEKQ
FGGKLPPMPAGLGAGKMPGLPGLGGPKMPGLGGFLPGKKK
NT seq 1563 nt   +upstreamnt  +downstreamnt
atgttcgaaggcctttccgaccgcctctccggcatcctctccggcctgacgcgccgcggt
gcgctgacggaagccgacgtcaccgccgccatgcgcgaggtgcgccgcgcactcctcgaa
gcggacgtggcgctggaggtggtgcgctcgttcaccgacaaggtgcgcgagaaggcggtg
ggcgccgtcgtcctcaagtcggtgacgcccggccagatggtcgtgaagatcgtcaacgac
gagctcatcgcgatgctcggcaccgatgccagcgtcgtcgatctcaacgcgcccgcccct
gtcgccatcctcatggtcggcctccagggatcgggcaagacgaccaccaccgccaagatc
gcccggcggctgaaccagcgtgacaagcgccgggtgctgctcgcctccctcgacacgcgg
cgtcccgcggcgatggagcagttggcggtgctcgccaagcaggtcgaggtcgagagcctg
ccgatcgtcgccggccagtcggcggtgcagatcgccaagcgtgccatggaagccgcccgc
ctcggcggtttcgacgtggtcatgctcgacacggccggccgcaccacggtcgacgaaggc
ctgatgaacgaggccgccgaggtgaaggcggcgacgagaccccacgaagtcctgctggta
gccgacgcgctcaccggccaggacgcggtcaacaccgcgcgcgccttcgacgagcgcctc
ggcgtcaccggtatcgtgctgacccgcatggacggtgattcccgcggcggcgcggcgctc
tccatgcgcgccgtcaccggcaagccgatcaagctcgtcggcgtcggcgagaaggtcgat
gcgctggaggaattccacccgcagcgggtggccaaccgcatcctcggcatgggcgacatc
gtctcgctcgtcgagaaggcggccgagacgatcgaccacgagcaggccctgcgcaccgcc
gagaagatgcggaagggcaagttcgatctcgaagacctgtcgatgcagctcgcccagatg
gagaagatgggcggcatcggcggcctgatggggatgctgcccggcatggggcagatgaag
aagcaggtcgagggcgccaacctcgacgagaagatgttcaagcgccagcgcgcgatcatc
tcctcgatgacgcctgcggagcgcaagaatccggatctgctcaagaacagccgcaagaag
cgcatcgcggcgggtgccggcgtcaaggtcgaggagatcaacaagctcctcaagatgcac
cggaccatggccgacatgatgaaggcgatgggttcgggcaaacgcggcggcatcggccag
gcgctcggcaacatgttcggcctcggcggcggcatgccgggcgggctgccgggcgggatg
aagctgccgccgggcatgccggagccgacgccggagcagatcgcggagatcgagaagcag
ttcggtggcaagctgccgccgatgccggcggggctcggggccggaaagatgccgggcctg
ccgggtttgggcggaccgaagatgccgggcctcggcggcttcctgccgggtaagaagaaa
tga

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