Methylobacterium sp. AMS5: Y590_04820
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Entry
Y590_04820 CDS
T04283
Name
(GenBank) RNA polymerase subunit sigma-24
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
meta
Methylobacterium sp. AMS5
Pathway
meta02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
meta00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Y590_04820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
meta03021
]
Y590_04820
Transcription machinery [BR:
meta03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Y590_04820
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
HTH_23
GerE
PhyR_sigma-like
Sigma70_r2
HTH_24
HTH_11
HTH_38
HTH_3
TnsD
HTH_40
Phage_terminase
HTH_IclR
CENP-B_N
Fe_dep_repress
HTH_28
MarR
Motif
Other DBs
NCBI-ProteinID:
AMB44206
LinkDB
All DBs
Position
983029..983544
Genome browser
AA seq
171 aa
AA seq
DB search
MARVAGVLDARLVETMFREHSSWLGSWLSRQPWTVHASEDIVSDVFLSLMTLPNVGSVRE
PRAMMTTIAKRIIFDARRRKKLQNAYEDALLTIPEAVDVSPEERLIIVQALQKIDAVLSQ
LSPRARAAFLMSQIDGMSNKEIAQELNVSLSAVSKYMTQGFSAVYLARADI
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
atggcacgtgttgctggcgttctggatgcaaggctggtcgagacgatgttccgggagcat
tcctcctggctcggctcgtggttgtcgcgacagccttggacggtccacgcctccgaagat
atcgtctcggatgtcttcctgtcgcttatgactctgccgaacgtgggaagcgtgcgtgaa
ccgcgcgcgatgatgaccacgatcgccaagcggatcatcttcgatgcccgccgccgcaag
aagcttcagaatgcctacgaggatgcgctcctgaccatcccggaggccgtcgacgtctcg
ccagaagagcggctcatcatcgtccaggcgctccagaagatcgatgccgtgctctcccag
ctgtcgcccagagcccgcgcggcattcctcatgagtcagatcgatggcatgtcgaacaag
gagatcgcccaggaactcaacgtctcgctcagcgccgtgagcaagtacatgactcagggc
ttttccgcggtctatctggcaagggcggacatctga
DBGET
integrated database retrieval system