KEGG   Methylobacterium sp. AMS5: Y590_04820
Entry
Y590_04820        CDS       T04283                                 
Name
(GenBank) RNA polymerase subunit sigma-24
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
meta  Methylobacterium sp. AMS5
Pathway
meta02020  Two-component system
Brite
KEGG Orthology (KO) [BR:meta00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    Y590_04820
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:meta03021]
    Y590_04820
Transcription machinery [BR:meta03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     Y590_04820
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r4 Sigma70_ECF HTH_23 GerE PhyR_sigma-like Sigma70_r2 HTH_24 HTH_11 HTH_38 HTH_3 TnsD HTH_40 Phage_terminase HTH_IclR CENP-B_N Fe_dep_repress HTH_28 MarR
Other DBs
NCBI-ProteinID: AMB44206
LinkDB
Position
983029..983544
AA seq 171 aa
MARVAGVLDARLVETMFREHSSWLGSWLSRQPWTVHASEDIVSDVFLSLMTLPNVGSVRE
PRAMMTTIAKRIIFDARRRKKLQNAYEDALLTIPEAVDVSPEERLIIVQALQKIDAVLSQ
LSPRARAAFLMSQIDGMSNKEIAQELNVSLSAVSKYMTQGFSAVYLARADI
NT seq 516 nt   +upstreamnt  +downstreamnt
atggcacgtgttgctggcgttctggatgcaaggctggtcgagacgatgttccgggagcat
tcctcctggctcggctcgtggttgtcgcgacagccttggacggtccacgcctccgaagat
atcgtctcggatgtcttcctgtcgcttatgactctgccgaacgtgggaagcgtgcgtgaa
ccgcgcgcgatgatgaccacgatcgccaagcggatcatcttcgatgcccgccgccgcaag
aagcttcagaatgcctacgaggatgcgctcctgaccatcccggaggccgtcgacgtctcg
ccagaagagcggctcatcatcgtccaggcgctccagaagatcgatgccgtgctctcccag
ctgtcgcccagagcccgcgcggcattcctcatgagtcagatcgatggcatgtcgaacaag
gagatcgcccaggaactcaacgtctcgctcagcgccgtgagcaagtacatgactcagggc
ttttccgcggtctatctggcaagggcggacatctga

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