KEGG   Methylobacterium sp. AMS5: Y590_11765
Entry
Y590_11765        CDS       T04283                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
meta  Methylobacterium sp. AMS5
Pathway
meta03030  DNA replication
meta03410  Base excision repair
meta03420  Nucleotide excision repair
meta03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:meta00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Y590_11765
   03410 Base excision repair
    Y590_11765
   03420 Nucleotide excision repair
    Y590_11765
   03440 Homologous recombination
    Y590_11765
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:meta03032]
    Y590_11765
   03400 DNA repair and recombination proteins [BR:meta03400]
    Y590_11765
Enzymes [BR:meta01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Y590_11765
DNA replication proteins [BR:meta03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     Y590_11765
DNA repair and recombination proteins [BR:meta03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     Y590_11765
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Y590_11765
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_pol_A_exo1 DNA_polI_exo1 Taq-exonuc HHH_5 HHH_2 EME1-MUS81_C NYN_YacP
Other DBs
NCBI-ProteinID: AMB45583
LinkDB
Position
2554300..2557440
AA seq 1046 aa
MTEETQPQPAKPVCADDRVILVDGSSFIFRAYFQSINQDQKYNTRPSDGLPTGAVRLFCT
KIAQFLQEGAAGVKPTHLGIVFDKSEGSFRKELFPDYKGHRPDAPDDLKRQMPLMRDAVR
AFGLHAVELMRYEADDLIATYARQAEARGAEVIIVSSDKDLMQLVSDKIRFYDFESGAKG
KPGYRPERNLDREAIIAKWEGLTPEQIGDALALIGDTSDNVPGVPGIGLKTAAALIKEYG
SLEQLLDRAAEIKQPKRREMLLANIDQAKLSRRLVALEENVPVPVPLDELVVPQPDPQKL
VGFLKAMEFNTLTRRIAQMLHVDPEAVKPDPALLPGAQPHAYTNAAGGSDAVPFFGDDVP
VDPETAAAPERTDGAAPPEAGEADPFADLDLPDQAPKKRGPGEPTPSTLVAARAAEAVKP
FDTSAYETIATVEQFKAWIAESYEAGVIAVDTETDALDAAKAGLVGVSLATAPGRAAYIP
LAHVKPEVKGGDLFGESGAEADASDRQPGQIDFDTALKLLKPLLEDAGTLKVGQNLKYDL
SVLHRYGIDVTPFDDTMLISYVLDAGKGGHGMDELARRHLGHQPITFADVAGTGRNKVTF
DRVAIDKATAYAAEDADVTLRLWRMMKPRLVAEHRVTVYETLERPLVPVLARMERAGIAI
DRNMLSRLSGDFSQILARLEEEIQDDAGERFQVSSPKQIGDVLFGKMGLPGAKKTPSGQW
ATPATLLEELAQAGHDLPKKILNWRQLSKLKSTYTDSLQQHADRGTNRVHTSFALAATTT
GRLSSSDPNLQNIPIRTEEGRRIRRAFVAPEGKKLISADYSQIELRLLAHIADIPQLREA
FEQGIDIHAATASAMFGVALDQMTGDLRRRAKTINFGIIYGISAFGLADRLGIGREEASA
FIKQYFERFPGIRDYIDTTKRSCREKGYVTTLFGRVCHYPQIRSNNPSERASVERQAINA
PIQGTAADIIRRAMTRMEDALEAKKLTARMLLQVHDELVFEVPDDEVEATIPVIAGVMEE
APAPALTLRVPLVVEARAAANWEEAH
NT seq 3141 nt   +upstreamnt  +downstreamnt
atgaccgaagagacgcaaccgcaaccggccaagcccgtctgcgccgacgaccgggtgatc
ctcgttgacggctcgtccttcatcttccgggcgtacttccagtcgatcaatcaggatcag
aagtacaacacgcggccctccgacggtctgccgaccggcgcggtgcgcctgttctgcacc
aagatcgcccagttccttcaggagggtgcggcgggggtgaagccgacccatctcggcatc
gtcttcgacaagtccgagggctcgttccgcaaggagctgttccccgactacaagggccac
cgccccgacgcgccggacgacctcaagcgccagatgccgctgatgcgcgacgcggtgcgc
gccttcgggctgcatgcggtggaactgatgcgctacgaggccgacgacctgatcgcgacc
tacgcgcggcaggccgaggcgcgcggcgccgaggtcatcatcgtgtcctccgacaaggac
ctgatgcagctcgtctcggataagatccggttctacgacttcgagtcgggcgccaagggc
aagcccggctaccggcccgagcgcaacctcgaccgcgaggcgatcatcgccaagtgggag
ggcctcacgcccgagcagatcggcgacgccctggcgctgatcggcgacacctccgacaac
gtgccgggcgtgccgggcatcggcctgaagacggcggccgcgctcatcaaggagtacggc
agcctcgaacagctcctcgaccgtgctgccgagatcaagcaacccaagcgccgggagatg
ctgctcgccaacatcgatcaggccaagctgtcgcgccgcctcgtcgcgctcgaagagaat
gtgccggtgccggtgccgctcgacgaactcgtcgtgccgcagcccgatccgcagaagctc
gtcggcttcctcaaggccatggagttcaacaccctgacccggcgcatcgcgcagatgctc
catgtcgatcccgaggcggtgaagcccgatccggcgctgctgccgggggcacagccccac
gcctacaccaacgcggccggcggcagcgacgcggtgccgttcttcggcgacgacgtcccg
gtcgatcccgagaccgccgccgcccccgagcggacggacggcgcggccccgccggaggcc
ggcgaggccgacccgttcgccgatctcgacctgccggatcaggcgccgaagaagcgcggt
cccggcgagccgacgccttcgacgctggtcgccgcccgcgcggcggaggccgtgaagccg
tttgacacgtcggcctacgaaaccatcgccaccgtggagcagttcaaggcctggatcgcc
gagagctacgaggccggcgtgatcgcggtcgataccgagaccgacgcgctcgacgcggcc
aaggcgggactcgtcggtgtctcgctcgcgaccgcgccggggcgggccgcctatatccca
ctcgcccacgtgaagcccgaggtgaagggcggcgacctgttcggcgagagcggggcggag
gccgatgcctctgaccggcagcccggccagatcgatttcgataccgccctgaagctgctc
aagccgctgcttgaggatgccggcacgctcaaggtcggtcagaacctgaaatacgacctc
tcggtgctgcaccgctacggcatcgacgtgacgcccttcgacgacacgatgctgatctcc
tacgtgctcgatgccggcaagggcgggcacggcatggacgagctcgcccggcgccatctc
ggccaccagccgatcaccttcgcggatgtggccggcaccggccgcaacaaggtcaccttc
gaccgcgtggcgatcgacaaggccacggcctacgcggcggaggacgccgacgtcacctta
cgcctgtggcggatgatgaagccgcgcctcgtcgccgagcatcgggtgaccgtctacgag
acgctggagcgcccgctggtgccggtgctggcgcggatggagcgggccggcatcgccatc
gaccgcaacatgctgagccgcctctccggcgacttctcgcagatcctggcgcggctggag
gaggaaatccaggacgacgcgggcgagcggtttcaggtctcgtcgcccaagcagatcggc
gacgtgctgttcggcaagatgggcctgcccggcgcgaagaagacgccttccggccagtgg
gccacgcccgcgacgcttctcgaagaactggcccaggccggccacgatctgccgaagaag
atcctcaactggcgccagctctccaagctgaaatcgacctacaccgattcgctgcagcag
cacgccgaccgggggaccaaccgcgtccacacctcgttcgcgctcgcggcgacgacgacc
ggccggctttcctcctcggatccgaacctgcagaacatcccgatccgtacggaggagggg
cggcgcatccgccgcgccttcgtcgcgcccgagggtaagaagctgatctcggccgattac
agccagatcgagctgcgcctgctcgcgcacatcgccgacattccgcaactgcgcgaagcg
ttcgagcaggggatcgacatccacgcggccacggcctccgccatgttcggcgtcgccctc
gaccagatgaccggcgatctgcggcggcgggccaagacgatcaatttcggcatcatctac
ggcatctcggccttcggtctcgcggaccggctcggcatcggccgcgaagaggcttcagcc
ttcatcaagcagtatttcgagcgctttcccggcatccgcgactacatcgacaccaccaag
cgctcgtgccgcgagaagggctacgtgacgaccctgttcggccgcgtctgtcactacccg
cagatccgctcgaacaacccgtccgagcgggcgagcgtggagcgccaagccatcaacgcc
cccatccagggcaccgctgccgacatcatccgtcgcgccatgacgcggatggaggatgcg
ctggaggccaagaagctcaccgcgcggatgctgctgcaggtgcacgacgaactcgtgttc
gaggtgcccgacgacgaggtggaggcgacgattcccgtgatcgccggggtgatggaagag
gcgcccgcgccggccctgacgctgagggtgccgctggtggtcgaggcgcgggcggcggcc
aactgggaagaggcgcactga

DBGET integrated database retrieval system