Methylobacterium sp. AMS5: Y590_12080
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Entry
Y590_12080 CDS
T04283
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
meta
Methylobacterium sp. AMS5
Brite
KEGG Orthology (KO) [BR:
meta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
meta03400
]
Y590_12080
Enzymes [BR:
meta01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
Y590_12080
DNA repair and recombination proteins [BR:
meta03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
Y590_12080
Prokaryotic type
Y590_12080
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
FAD_binding_7
DUF5946
Motif
Other DBs
NCBI-ProteinID:
AMB45646
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All DBs
Position
complement(2623348..2624751)
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AA seq
467 aa
AA seq
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MAIQPARIRVLNDVKPSEGADYVLYLMQQAMRVPFNPALELAIEEANRLELPLLVCFGLL
DGANGFPEANARHYAFLLQGLADAAAALEKRGIAFLVRRATPAEVAVDLSDKAALLVLDR
GYLAIQKRWYDEIGRAAQCRIVQVEGDVVVPVETASTKHEYAARTLRPKLRKLWDDYLEP
VRPRTVDHPSEGLIERLKLKAGLDVSDSKKLLAKLTLDTTVGPVKRFRGGYTEAAGHLKR
FVKDAFAGYGAGRNKPEAGAASHMSPYLHFGHISPVEIALAIRAAKDGDPDDRSAYLEEL
IVRRELAMNHVFHTQGYDDYARAVPDWARKTLAEHAGDERPKLYSDEDLAEGMTHDHYWN
VAMREMRETGYMHNQLRMYWGKKILEWSPSPEEAFARTLRLNNRYFLDGRDANSFTNVAW
IFGLHDRPWQTRKIFGSVRYQSENSLRKFDTKGYERAVTRLCEEEKD
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggcgatccaaccggcccgcatccgggtgctgaacgacgtgaagccatccgagggcgcc
gattacgtcctgtacctgatgcagcaggccatgcgcgtcccgttcaatccggcgttggaa
ctcgcgatcgaggaggccaaccgcctcgaactcccgctcctcgtctgcttcggcctgctc
gacggtgccaacggcttccccgaggccaatgcccggcactacgccttcctgctgcagggg
ctcgccgacgcggccgccgccctggaaaagcgcggcatcgcctttctcgtgcgccgggcg
acgcccgcggaggtcgccgtcgacctctcggacaaagccgcgctgctggtgctcgaccgc
ggctacctcgcgatccagaaacgttggtacgatgaaatcggacgcgcggcgcaatgccgg
atcgtccaagtcgagggcgatgtagtggtgccggtcgagaccgcctcgaccaagcacgaa
tacgccgcgcgcaccctgcgcccgaagctccggaagctctgggacgattatctcgaaccc
gtgagaccgcgcacggtcgatcacccgtccgaagggctgatcgagcggctgaagctgaag
gctgggctcgacgtctcggattcgaaaaaacttctcgcgaagctgaccctcgacaccacg
gtcggcccggtgaagcgcttccgcggcggctacaccgaggccgccgggcatctcaagcgc
ttcgtaaaggacgcgttcgccggctacggcgccggccgcaacaaaccggaggcgggggcg
gcctcccacatgagcccctacctgcatttcgggcacatctcgccggtcgagatcgcactg
gcgatccgcgccgccaaggacggcgaccccgacgaccgctcggcctatctcgaggagctg
atcgtccggcgcgaactggcgatgaaccacgtcttccacacgcagggctacgacgactac
gcccgcgccgtgcccgactgggcccgcaagacgctggccgagcatgccggcgacgagcgc
ccgaaactctattccgatgaggatctggcggaggggatgacccacgaccattactggaac
gtcgccatgcgcgagatgcgcgagaccggttacatgcacaaccagctccgcatgtactgg
ggcaagaagatcctcgaatggtcgccctcgccggaggaggcgttcgcccggacgctgcga
ctcaacaaccgctacttcctcgacgggcgcgacgcgaactccttcaccaacgtcgcctgg
atcttcgggctgcacgaccgcccgtggcagacccggaagattttcgggagtgtgcgctac
cagagcgagaactcgctcaggaagttcgacacgaagggctacgagcgggcggtgacgcgg
ctgtgcgaggaagagaaggattga
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