Methylobacterium sp. AMS5: Y590_13355
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Entry
Y590_13355 CDS
T04283
Name
(GenBank) PAS sensor protein
KO
K12146
hydrogenase-4 transcriptional activator
Organism
meta
Methylobacterium sp. AMS5
Brite
KEGG Orthology (KO) [BR:
meta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
meta03000
]
Y590_13355
Transcription factors [BR:
meta03000
]
Prokaryotic type
Helix-turn-helix
Other families
Y590_13355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
PAS_9
PAS
PAS_4
PAS_8
AAA_5
AAA
PAS_3
AAA_16
AAA_2
Mg_chelatase
TIP49
bpMoxR
TetR_C_28
HTH_8
PAS_7
BrxC_BrxD
Motif
Other DBs
NCBI-ProteinID:
AMB45902
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Position
2895109..2896998
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AA seq
629 aa
AA seq
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MSSSALDAPSVYGLAFDENREAMLVFEPLTDRIDDANEAAARLLGHDRAALRAMPVSALH
PDQRPALVLFTQAVLAEGQWWTHALTPCHGAGKPLRLEFSGCVLSGEPTRLLVTLFDLEE
RERRRIDREAEEHMRAGLPEWQRMERIFRDIERGNRLILRAAGEGIYGVNADGITTFVNP
AAERMLGWASADLVGKDMHATVHHTRAGGAHYPHHDCPIYAAFRDGAVHQVDGEVFWRKD
GTCFPVEYTSTPIREGGQLLGAVIVFRDVSQRREDEARLRAALAEVDSLRERLEQENAYL
KEEIRAESHHQGIIGRSPAMEALLRQIDVVAGTDATVLVAGESGTGKELIARAIHEASRR
RERPLIRVNCAAIPRDLFESEFFGHAKGAFTGALRDRIGRFELADGGTLFLDEVGEIPLD
LQGKLLRVLQERQFERVGEERTRAVDIRLIAATNRDLKEEVRRERFREDLYFRLNVFPLT
SAPLRERREDVPLIAQHVLKAAARRLNRTDLRLTEADARRLSRYDWPGNVRELENVIERA
AILAERGRLRFDLPETRSTGSVAPAPERPQTLGRPLSEEERRARARSEIEAALHISGGKV
FGAGGAAELLGLKPTTLRSRMKVLGIEPL
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcatcagcgctggatgcgccctcggtttacggcctcgccttcgacgaaaatcgc
gaggcgatgctggtgttcgagcccctgacggaccgaatcgacgacgccaacgaggcggcc
gcccggttgctcggccacgaccgcgccgccctgcgggcgatgccggtgagcgccctgcat
cccgaccagcggcctgcgctcgtgttgttcacgcaggcggttctcgccgaggggcaatgg
tggacgcacgccctcaccccgtgccacggcgccggcaagccgttgcggctcgaattttcc
ggctgcgtgctgtcgggtgagccgacgcggctcctcgtcaccctcttcgatctcgaggag
cgcgagcgccgccgcatcgaccgggaggccgaggagcacatgcgcgccggcctgccggaa
tggcagcgcatggagcgcatctttcgcgacatcgaacgcggcaaccggctgatcctgcgc
gcggcgggggaggggatctacggcgtcaacgcggacgggatcaccaccttcgtcaacccg
gccgcggagcggatgctgggatgggcctcggccgatctcgtcggcaaagacatgcacgcc
accgtgcaccatacccgcgcgggcggtgcgcattacccgcatcacgactgcccgatctac
gcggccttccgcgacggcgccgtgcatcaggtcgacggcgaggtgttctggcgcaaggac
ggcacctgctttccggtcgagtacacttcgacgccgatccgcgagggcgggcaattgctt
ggcgcggtgatcgtgtttcgcgatgtcagccagcgccgtgaggatgaggcccgattgcgg
gccgcgctggccgaagtcgattccctgcgcgagcgcctggagcaggagaacgcctacctg
aaggaggaaatccgcgccgagagccaccatcagggcatcatcgggcgtagcccggccatg
gaggcgttgctgcgccagatcgacgtggtggcaggcaccgatgccaccgttctcgtcgcc
ggcgaatccggtactgggaaggagttgatcgcccgggccatccacgaggcaagccgccgc
cgcgagcggccgctgatccgcgtgaactgtgcagcgatcccgcgcgacctgttcgagagc
gagttcttcggccacgcgaagggcgccttcaccggggctctgcgcgaccggatcgggcgg
ttcgaactcgccgacggcggcacgctgttcctcgacgaggtcggagagatcccgctcgac
cttcagggcaagctgcttcgcgtcctccaagagcgccagttcgagcgggtcggcgaggag
cgcacccgcgcggtcgatatccggctgatcgccgcgaccaaccgcgacctcaaggaggag
gtgcgccgcgagcgctttcgcgaggatctctacttccgcctcaacgtcttccccctgacc
tccgcgcccctgcgggaacgccgcgaggacgtgccgctgatcgcgcagcatgtcctgaag
gccgccgcgcggcgcctcaaccggacggatctgcgcctgaccgaggccgacgcccgccgc
ctgtcccgctacgattggccgggcaacgtgcgcgagttggagaacgtgatcgagcgcgcc
gcgattctcgccgagcgcgggcgcctgcgcttcgatctgccggaaacccgcagcaccggt
tctgtcgcgcccgcgccggagcgcccgcagactctcggccggccgctgtccgaagaggag
cgccgcgcccgtgcccgcagcgagatcgaggcggcgcttcacatcagtggcggaaaggtc
ttcggtgccggcggcgcggccgagctgctcggcctcaagccgacgacgttgcgctcgcgg
atgaaggtgctcgggatcgaaccgctctga
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