KEGG   Methylobacterium sp. AMS5: Y590_15385
Entry
Y590_15385        CDS       T04283                                 
Name
(GenBank) helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
meta  Methylobacterium sp. AMS5
Brite
KEGG Orthology (KO) [BR:meta00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:meta03400]
    Y590_15385
Enzymes [BR:meta01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Y590_15385
    5.6.2.6  RNA 3'-5' helicase
     Y590_15385
DNA repair and recombination proteins [BR:meta03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    Y590_15385
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr DEAD Helicase_C ResIII Cas3-like_C_2
Other DBs
NCBI-ProteinID: AMB46305
LinkDB
Position
3308731..3311232
AA seq 833 aa
MPAPPDLPPRFSAWFASRGWSPRPHQLELLATVRSGRSALLVAPTGAGKTLAGFLPSLVE
LSERQGTKGKKTGLHTLYVSPLKALAVDIARNLEAPIEGMELPVTVETRTGDTPAHKRAR
QIQRPPDILLTTPEQLSLLLAHREAEVFFAGLKTVVLDELHALVTSKRGDLLSLALARVR
RLAPEARAIGLSATVREPEELQKYLVGQVPGEDRRADLVVVKGGAKPDLHMLEVNRTLPL
AGHTAWHSMPAIYDLIRAHRMVLVFVNTRLQAEYTFQELWRLNDDTLPIALHHGSLDATQ
RRRVEAAMAAGQLRAIVCTATLDLGIDWGDVDLVVNLGAPKGASRIMQRIGRANHRMDEP
SKAYLVPGNRFEMLECRAALDAVEEAAQDTPDARLGAPDVLAQHVLGMACADAFDPLELY
DEVISAAPYATLSWEDFEAVVDYVATGGYALRAYERFAKILRGADGKWRVRDARVAQQYR
MNIGTIVESTHIKVRMARSLRAKPGTVLPKGGRTLGEIEEDFAETLTVGDTFLFAGEVLR
FEGLAEDECLVTRAGPGTDPAIPSYAGSKFPLSTFLAARVRAIIADPFEWDRLPRQLSDY
LAQQRRHSVLPGERDLLVETFSRAGRHYLTAFPFEGRLAHQTLGMLLTRRLERARLRPLG
FAANDYGIAIWCTRDLSERAALSPDFMEALFDEDMLGDDLEAWLDESAMMKRTFRQCAVI
AGLIERRFPGQKKTGRQVTISTDLIYDVLRRHQPDHLLLRAARQDAATGLLDVTRLGMML
RRIRGRITHRALDRVSPLSVSVMLEIGRERVYGEGADEILAEAEAELLQEALG
NT seq 2502 nt   +upstreamnt  +downstreamnt
gtgccagcgcccccagacctcccgccgcgcttctccgcgtggttcgcctcccgcggctgg
tcaccccgcccgcatcagctcgaactgctcgcgaccgtccggtccggacgctcggcgctg
ctcgtcgcccccacgggcgcgggcaagacgctggccggcttcctgccgagcctggtcgag
ctgagcgagcggcaagggaccaagggcaagaagacgggactgcacaccctctacgtctcg
ccgcttaaggcgctcgcggtcgacatcgcccgcaacctcgaagcgccgatcgaaggcatg
gaactgcccgtcacggtcgagacccgcaccggcgacaccccggcgcacaagcgcgcgcgg
cagatccagcgcccacccgacatcctgctcaccacgcccgaacagctctcgctgctgctc
gcccaccgggaagcggaggtcttcttcgccgggctgaagacggtcgtgctcgacgagttg
cacgccctcgtcacctcgaagcgcggcgatctcctctccctcgcgctcgcccgcgtgcgc
cgactggcaccggaggcccgcgccatcggcctctcggccaccgtgcgcgaaccggaggaa
ctccaaaagtacctcgtcgggcaggtgccgggcgaggaccgccgggccgacctcgtcgtg
gtgaagggcggtgccaagcccgacctgcacatgctcgaagtgaaccggacgctcccgctc
gccggccacaccgcctggcactcgatgccggcgatctacgacctgatccgggcgcaccgc
atggtgctcgtcttcgtcaacacccgcctccaggccgagtacaccttccaggaactgtgg
cggctcaacgacgacacgctgccgatcgccctgcatcacggctcgctcgacgccacgcag
cgccgccgggtcgaggcggcgatggcggcggggcagttgcgcgccatcgtctgcaccgcg
acgctcgatctcggcatcgactggggcgacgtcgatctcgtggtcaatctcggcgcgccg
aagggcgcgagccggatcatgcagcggatcggccgggccaaccaccgcatggacgagccg
tcgaaggcttatctcgtccccggcaaccgcttcgagatgctggaatgccgggccgccctc
gacgcggtggaggaggcggcccaggacacgccggacgcccgcctcggcgcccccgacgtg
ctcgcccagcatgtgctgggtatggcctgcgccgacgccttcgatccgctcgaactctac
gacgaggtcatctcggcggcaccctacgccaccctctcgtgggaggatttcgaggcggtg
gtcgattacgtcgccaccggcggctacgcgctgcgcgcctacgaacgcttcgccaagatc
ctgcgcggggccgatgggaaatggagggtgcgcgacgcccgggtggcgcagcaataccgc
atgaacatcggcaccatcgtcgagtcgacgcacatcaaggtgcggatggcccgcagcctg
cgcgccaagcccggcaccgtgctgccgaagggcgggcggaccctcggcgagatcgaggag
gatttcgccgagacgctcaccgtcggcgataccttcctgttcgcgggcgaggtgctgcgc
ttcgaggggctcgccgaggacgagtgcctcgtcacgcgcgccggccccggcaccgatccg
gcgattccctcctatgccggctcgaagttcccgctctcgaccttcctcgccgcgcgggtg
cgggcgatcatcgccgacccgttcgagtgggaccgcctgccgcgccagctctcggactac
ctcgcgcagcagcgccgccactcggtcctgcccggcgagcgcgacctcctggtcgagacg
ttttcgcgcgcagggcgccactacctcaccgccttcccgttcgaggggcggctcgcccac
cagacgctcggcatgctgctaacccgccgtttggaacgcgcccggctgcgcccgctcggg
ttcgcggccaacgattacggcatcgccatctggtgcacgcgggatctgagcgagcgcgcc
gcgctctcgccggacttcatggaggccctgttcgacgaggacatgctcggcgacgacctg
gaggcctggctcgacgagtcggcgatgatgaagcgcaccttccggcaatgtgcggtcatc
gccgggttgatcgagcggcgctttcccggccagaagaagaccggccggcaggtcacgatc
tcgaccgacctgatctacgacgtgctgcgccgccaccagcccgaccacctgctcctgcgc
gccgcgcggcaggatgcggcaaccggactcctcgacgtaacccgcctcggcatgatgctg
aggcgtatccgggggcgaatcacccacagggcgctcgaccgggtctcgccgctctccgtg
tccgtcatgctcgaaatcgggcgcgagcgggtctacggggagggggccgacgagatcctg
gctgaggccgaagccgagcttcttcaagaggcgctcggctga

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