Methylobacterium sp. AMS5: Y590_16820
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Entry
Y590_16820 CDS
T04283
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
meta
Methylobacterium sp. AMS5
Pathway
meta00300
Lysine biosynthesis
meta00470
D-Amino acid metabolism
meta01100
Metabolic pathways
meta01110
Biosynthesis of secondary metabolites
meta01120
Microbial metabolism in diverse environments
meta01230
Biosynthesis of amino acids
Module
meta_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
meta00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Y590_16820
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Y590_16820
Enzymes [BR:
meta01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
Y590_16820
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AMB46597
LinkDB
All DBs
Position
complement(3614710..3616005)
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AA seq
431 aa
AA seq
DB search
MTQAVSPDLAAALIAENFSRDASGVLRVGGLPLTDLAKDFGTPLFVYDADTMRRTYRALC
AALAGFAEVDFSVKANPNPAVIRVFSEEGAGAEIASGAEFDAAIRAGVPPEKILFAGPGK
GAADLDRVIGGGIGEIHLENREEIVRVAAAAERHGARARVALRINPGATAQGGAMRMGGK
PSPFGFDEEDIEAAIDTVEAAPHLRLVGLHLFAGTQGLKADTLLGQWTYGLGLAARIANR
IGRPLETIDLGGGLGIPYFSGDTALDLGAIRAGLPGLIATLRAEPLLASARVVLEPGRYL
TGPAGVYVARVLAVKASRGSRFVITDGGMHHHLAASGNLGQIVKRDFPLAAVTDAGGAPA
ATAVVGPLCTPLDMLARAAPLPPLAEGDLVAVLQSGAYGLTASPTGFLSHPTPAELLVER
GEAREIRARGP
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgacccaggctgtctctcccgacctcgccgctgcgctgatcgccgagaacttctcgcgc
gatgcgagcggcgtgctgcgggtcggcggcctgccgctgaccgacctcgcaaaggatttc
ggcacgccgctcttcgtctacgacgccgacacgatgcgccggacctaccgggcgctgtgc
gcggcactcgcgggcttcgcggaggtggatttttcagtcaaggcgaaccccaacccggcg
gtgatccgcgtcttctccgaggagggcgcgggggccgagatcgcttccggcgccgagttc
gacgccgcgatcagagcgggtgttcctccggaaaagatcctcttcgccggcccaggcaag
ggcgcggccgacctcgaccgggtgatcggcggcggcatcggcgagatccatctcgaaaac
cgcgaggagattgttcgcgtcgcggcggcggccgagcgtcacggcgcgcgcgcgcgggtg
gcgctgcggatcaatcccggcgcgacggcgcaaggcggggcgatgcggatgggcggcaag
ccctcgccgttcggcttcgacgaggaagacatcgaggccgccatcgacacggtggaggcc
gccccgcacctgcgcctcgtcgggctccacctgttcgcgggcacgcaagggctgaaggcc
gataccctcctcggccagtggacctacgggctcggacttgcggcgcggatcgcgaacaga
atcgggcggccgctggagacaatcgatctcggcggcggcctcggcatcccgtacttctcc
ggcgacaccgccctcgatctcggcgcgatccgggccgggctgcccggcctgatcgccacc
ctgcgggccgagccgctgctggcgagcgcccgcgtggtgctggagcccggccgctatctc
accgggccggcgggcgtctacgtggcgcgggtgctggcggtgaaggcgtcgcgcggcagc
cgcttcgtcatcaccgacggcggcatgcaccaccatctcgccgcgagcggcaatctcggc
cagatcgtcaagcgcgactttcccctcgcggccgtgaccgatgcgggcggtgcgcccgcg
gcgaccgcggtcgtcggcccgctctgcacgcccctcgacatgctggcccgggcagccccc
ttgccgccgctggccgagggcgacctcgtcgcggtgctgcaatcgggggcctacgggctc
accgcgagcccgacgggattcctgagccacccgacaccggccgagctgctggtggagagg
ggcgaggcccgcgagatccgggcgcgtgggccttga
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