Methylobacterium sp. AMS5: Y590_17805
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Entry
Y590_17805 CDS
T04283
Name
(GenBank) succinate dehydrogenase
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
meta
Methylobacterium sp. AMS5
Pathway
meta00020
Citrate cycle (TCA cycle)
meta00190
Oxidative phosphorylation
meta00650
Butanoate metabolism
meta00720
Other carbon fixation pathways
meta01100
Metabolic pathways
meta01110
Biosynthesis of secondary metabolites
meta01120
Microbial metabolism in diverse environments
meta01200
Carbon metabolism
Module
meta_M00009
Citrate cycle (TCA cycle, Krebs cycle)
meta_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
meta_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
meta00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Y590_17805
00650 Butanoate metabolism
Y590_17805
09102 Energy metabolism
00190 Oxidative phosphorylation
Y590_17805
00720 Other carbon fixation pathways
Y590_17805
Enzymes [BR:
meta01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
Y590_17805
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
GIDA
DAO
HI0933_like
Pyr_redox_2
Thi4
FAD_oxidored
FAD_binding_3
Motif
Other DBs
NCBI-ProteinID:
AMB46792
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Position
3816959..3818776
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AA seq
605 aa
AA seq
DB search
MASNGTNGGAPAYAIIDHTFDVVIVGAGGAGLRATVGCSQAGLRTACITKVFPTRSHTVA
AQGGISASLGNMGPDDWRWHMYDTVKGSDWLGDQDAIEYLVRNAPAAVYELEHWGVPFSR
TDEGKIYQRPFGGMTTDYGKGTAQRTCAAADRTGHAMLHTLYGQAVKNKTQFFIEYFALD
LIMDEDGRCRGVIAIDQATGEIHRFRAQQTILATGGYGRAYFSATSAHTCTGDGNAMVLR
AGLPLQDMEFVQFHPTGIYGAGCLITEGARGEGGYLTNSEGERFMERYAPSAKDLASRDV
VSRSMTMEIRDGRGVGKDKDHIFLHLDHLDPKILHERLPGISESAKIFAGVDVTKEPIPV
LPTVHYNMGGIPTNFHGEVLTLKNGNPDTVVPGLMALGEAACVSVHGANRLGSNSLIDLV
VFGRAAGLRCADIVEPDARQPELPKGSADKALTRLDRFRYADGGTPTAQLRDRMQRTMQN
NCAVFRTGEVLEEGKGLIHEVWRGVSDIAITDRSLVWNTDLLETLEFDNLIGQAVVTMES
AVNRKESRGAHAREDFPDRDDKEWMKHTLAWLDQSKHGVEIDYRPVHTYTMSNDIQYIEP
KARVY
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggcctccaacggaacgaacggcggcgcgcccgcctacgccatcatcgaccacaccttc
gacgtggtgatcgtcggcgccggcggcgcgggcctgcgcgccacggtcggctgctcccag
gccggcctgcgcaccgcctgcatcacgaaagtcttcccgacccgctcgcacacggtggcg
gcgcagggcggcatctccgcctcgctcggcaatatggggccggacgactggcgctggcac
atgtacgacaccgtgaagggctcggactggctcggcgaccaggacgcgatcgagtacctc
gtgaggaacgcccccgcagcggtctacgagctggagcactggggcgtgccgttctcccgc
acggacgagggcaagatctaccagcgcccgttcggcggcatgaccaccgattacggcaag
ggcaccgcgcagcgcacctgtgccgcggccgaccgcaccggccacgccatgctccacacg
ctctacgggcaggcggtgaagaacaagacccagttcttcatcgagtatttcgcactcgac
ctgatcatggacgaggacgggcgctgccgcggcgtcatcgccatcgaccaggcgaccggc
gagatccaccgcttccgcgcccagcagaccatcctcgccaccggcggctacggccgcgcc
tacttctcggcaacctcggcccatacctgcaccggtgacggcaatgccatggtgctgcgc
gccggcctgccgctgcaggacatggagttcgtgcagttccacccgaccggcatctacggc
gccggctgcctcatcacggaaggcgcgcgcggcgagggcggctacctcaccaactccgag
ggcgagcgcttcatggagcgctacgccccctcggccaaggacctcgcctcccgcgacgtg
gtctcccgctcgatgaccatggagatccgcgacggccgcggcgtgggcaaggataaggac
cacatcttcctgcacctcgaccatctcgacccgaagatcctgcacgagcgcctgcccggc
atctcggagagcgcaaagatcttcgcgggcgtggacgtgaccaaggagccgatcccggtt
ctgccgacggtccactacaacatgggcggcatcccgaccaacttccacggcgaggtgctg
accctcaagaacggcaaccccgacacggtggtgccgggcctgatggcgctcggcgaggcg
gcctgcgtctcggtgcacggggccaaccgcctcggctcgaactcgctgatcgacctcgtg
gtgttcggccgcgccgcgggtctgcgctgcgccgacatcgtcgagcccgatgcccgccag
ccggaactgccaaagggctcggccgacaaggcgctcacgcgcctcgaccgcttccgctat
gccgacggcggcaccccgaccgcgcagctgcgcgaccggatgcagcggacgatgcagaac
aactgcgccgtcttccgcaccggcgaggtgctggaggagggcaagggcctgatccacgag
gtctggcgcggcgtctccgacatcgccatcaccgaccgttcgctcgtttggaacaccgac
ctgctcgagaccctggaattcgacaacctgatcggtcaggcggtcgtgaccatggaatcg
gcggtcaaccgcaaggaaagccgcggcgcgcatgcccgcgaggacttccccgaccgcgac
gacaaggagtggatgaagcacacgctcgcgtggctcgaccaatccaagcacggcgtcgag
atcgattaccgcccggtccacacctacacgatgtcgaacgacatccagtacatcgagccg
aaggcgcgggtttactga
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