Methylobacterium sp. AMS5: Y590_19885
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Entry
Y590_19885 CDS
T04283
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
meta
Methylobacterium sp. AMS5
Brite
KEGG Orthology (KO) [BR:
meta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
meta03016
]
Y590_19885
Enzymes [BR:
meta01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
Y590_19885
Transfer RNA biogenesis [BR:
meta03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
Y590_19885
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
AMB47208
LinkDB
All DBs
Position
4284707..4285273
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AA seq
188 aa
AA seq
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MPRLFTGLEIPPDIAERLSFFRGGLPGARWIEPGDYHVTLRFLGEIDAMIAADIDAGLRE
ARVRAPLTVTLDGLASFGGDRPRALYASVVPTPELIDLQEEHERIARRAGAAPERRKFTP
HVTLARLNREASPEAVARRLAEAGVFVRLTFTVRRAALFSARTSRGGGPYLVEAAYPFAD
ADFELDDE
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgcctgttcaccgggctcgagatcccgccggacatcgccgagcggctgtcgttc
ttccgcggcggcctgcccggcgcccgctggatcgagccgggcgactaccacgtcaccctg
cggttcctcggcgagatcgacgccatgattgccgccgatatcgatgccggcctgcgggag
gcgcgggtgcgcgcgccgctcaccgtgacactggacgggctggcgagcttcggcggcgac
cggccgcgggcgctctacgcctcggtcgtccccaccccggagctcatcgacctacaggag
gagcacgagcgcatcgcccgccgggccggggccgcgccggagcggcgcaagttcacgccg
cacgtgacgctggcccgcctcaaccgcgaggcctccccggaggccgtggcgcgaaggctg
gccgaggcgggggtgtttgtccgcctgaccttcacggtgcgccgcgccgccctgttctcc
gcccgcacctcgcgcggcggcgggccctacctcgtcgaggcggcctatcccttcgcggat
gcggatttcgagctggacgacgaatag
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