Methylobacterium sp. AMS5: Y590_22030
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Entry
Y590_22030 CDS
T04283
Name
(GenBank) hypothetical protein
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
meta
Methylobacterium sp. AMS5
Pathway
meta03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
meta00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Y590_22030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
meta03400
]
Y590_22030
Enzymes [BR:
meta01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
Y590_22030
DNA repair and recombination proteins [BR:
meta03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
Y590_22030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
Motif
Other DBs
NCBI-ProteinID:
AMB47633
LinkDB
All DBs
Position
complement(4745866..4747287)
Genome browser
AA seq
473 aa
AA seq
DB search
MRHHRFPAWKDTPPHQPHPGGDAPPRARHDRGSALEPDSLSADVHELRDVIGWLRQRLRG
EHSVRACVLTVEAAGPDSYLLLLGEAQASLSYDPPRLKVRLDAPELVLIRAEHGVDFDPA
DLVNRTIAVQLRTGLRQRFGRGAGVQAKLMALLSLGQIPLEADIERECTLQRLRLEGARF
GPDNWVEPEDLHHVALVVSEHGEARRDVEHVLQSLEGAGLLRLHRVWANFEGAGAERTLV
EAFTRVRSLHAEYGLSATLVCRGGGPIEAFRPLNSYAIAHAATADRVPNLIVGLGHAGTP
RTALDAVAARSEPTPTAAAMLVRHLVERTGLRAERALAAFEAAIEEDLGAASRIALARAT
TAFDMALQDLVTAAEARLRQLDRAVEQSLLLGLSAAVGGITRKEPDADPVEVDPLGDTED
DAALSAALVLVIATDTGCIVTSAQDLSAGLPLLLQFPDGAVPVQVEPFSFTAH
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgcgacatcaccgatttcccgcctggaaggacacgccgccacaccagcctcatcccggc
ggcgacgcgccaccgcgcgcccgtcacgaccgcggcagcgcactcgaacccgactcactc
tccgccgacgtgcacgaactgcgcgacgtgatcggctggctgcgccagcggctgcgcggc
gaacacagcgtgcgggcctgcgtcctcacggtcgaggccgccggtcccgacagctatctc
ctcttgctcggcgaagcgcaggcgagcctgagctacgatccaccgcgcctgaaggtccgt
ctcgatgcccccgagctcgtcctaatccgagcggagcatggcgttgacttcgatccggcc
gacctcgtcaaccgtaccatcgcggttcagttacgcaccggcctgcgtcagcggttcggc
cgcggagccggcgtccaagccaagctcatggccctgctctcgctcgggcagatcccgctc
gaagcagacattgagcgcgagtgcacgctgcagcgcctgaggctcgagggagcccgtttc
gggccggacaactgggtcgagccggaggatctccatcatgttgcgctcgtcgtctcagag
catggcgaggcgcggcgcgacgtcgagcacgtgctgcagtcgctcgaaggggccggcctc
ctccgcctccaccgggtgtgggccaacttcgagggtgccggggccgagcgcacgttggtc
gaagcgtttacccgcgtcaggagcctgcatgccgagtacggcctgtcggcgaccttggtc
tgccgcggcggtgggccgatcgaagcattccgtccgctcaacagctacgcgatcgcgcat
gctgcgacagcagatcgggtgccgaacctgatcgtcggcctcggccatgccggcacgccg
cgcaccgccctcgatgcagtggcggcgcgctccgagccgactccgacggcggcggcgatg
ctggtgcgccacctcgtcgagcgcaccgggctccgggccgagcgcgcgctcgccgctttt
gaggctgcgatcgaggaggatctcggggcggccagccgcatcgccctggcacgagccacg
accgccttcgacatggcgctgcaagatctcgtcaccgcggccgaagcacgactgcgacag
ctcgatcgggccgtcgagcagagcctactgctgggattgagcgcggcagtcggcgggatc
acgcggaaagaaccagatgccgatcccgtcgaggtggatcctctcggtgacaccgaggac
gacgcagccctgagcgcagccctggtgctggtgatcgcgaccgatacgggctgcatcgtc
accagcgcccaggatctctcagcgggcctgccgctgctgctgcagttcccggacggcgcc
gtaccggtccaggtcgaacctttctctttcaccgcccactga
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