Methylobacterium sp. AMS5: Y590_24375
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Entry
Y590_24375 CDS
T04283
Name
(GenBank) peptidoglycan-binding protein
KO
K21470
L,D-transpeptidase YcbB
Organism
meta
Methylobacterium sp. AMS5
Brite
KEGG Orthology (KO) [BR:
meta00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
meta01002
]
Y590_24375
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
meta01011
]
Y590_24375
Peptidases and inhibitors [BR:
meta01002
]
Cysteine peptidases
Family C82
Y590_24375
Peptidoglycan biosynthesis and degradation proteins [BR:
meta01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
Y590_24375
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
AMB48106
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Position
5299875..5301716
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AA seq
613 aa
AA seq
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MRAPAHPVGEAVSELVTNPADDRTVHPMRSAMPNVIPAPRRPRRARLIGGTGAALALLLA
GPLRAESVPEPQPDSRINLRIEPKAEAAPEPKRELRADPKPEPKVDPKPDPKTAPKLERP
TADTVAVPAEMPPVKKASRELPPVVYARVSEDPLPSYTAQTFVDTMRAAERYQVYAEAGG
WKTLPADFAPKPGESHAAIPSLRHHLTLTGDLPADAPPSDRFDPPLVAAVKSFQARHGLP
DAGIFGRLTLNALNVPADVRQRQLRASAQRLMGSSFGFGERYVTVNIPSATVEAVEKGAV
TRRYVAVVGSPDKQTPAVETRITDVNLNPTWTVPVSVIKNEIIPTMRKNPGYLAKNRIRI
LGPGGVEVDPTAIDWNTQKATNYTLRQDSGLDNSLGQVRIDMPNRHAIYMHDTPSKSLFA
GSVRFHSHGCVRVGQVKEFAAWLLQGTEGPNGPGSAWGPIEIETAIAVGERRDAKLVKPT
PVAFVYLTGYATSDGRVHFRDDIYGLDTPPAPAAATPLTPDVTTTGAITPRTAPAPRPAA
PGVAPRPLPSTAQGAPVRPAPVKPAPVGAAPTPAPATALPAPPKPQARKAAPPTRGPESE
PVPMPPGLVGGRG
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
ttgcgtgctccggcacaccccgtgggcgaggcggtgagcgagttggtaaccaaccccgcc
gatgatcggaccgtgcacccgatgagatccgcgatgccgaatgttatccccgccccgcgc
aggccccgccgcgcccggctcatcggcggcacgggagccgccctcgccctgctgctcgcc
ggtccgctccgggccgagtccgtccccgagccgcagccggattcccggatcaacctgcgg
atcgagccgaaggccgaggccgcgccagagccgaaacgcgagctgagggccgatcccaag
ccggagcccaaagtcgacccgaagcccgacccgaagaccgcgccgaaactggagcgcccg
accgccgatacggtggcggttccggccgagatgcctccggtcaagaaggcgtcgcgggaa
ttgccgccggtcgtctacgcccgcgtgtccgaggatccgctgccgagctacaccgcgcag
accttcgtcgacacgatgcgcgccgccgagcgctatcaggtctatgccgaggccggcggc
tggaagacgctgcccgccgacttcgctccgaagcccggcgaaagccacgccgcgatcccc
tcgctgcgccatcacctcaccctgactggcgaccttccggccgacgcgcccccctccgac
cgcttcgatccgccgctggtggcggccgtgaagtcgttccaggcccgccacggcctgccg
gatgccggcattttcggccggctgacgctgaacgccctcaacgtgccggccgacgtgcgg
cagcggcaactgcgcgcctcggcgcagcggctgatggggtcgagcttcggcttcggcgag
cgctatgtgaccgtgaacatcccctccgccacggtggaggcggtggagaaaggcgcggtg
acccgccgctacgtcgccgtggtcggctcgcccgacaagcagacgcccgcggtcgagacc
cgcatcaccgatgtgaatctaaacccgacctggaccgtgcccgtttcggtgatcaagaac
gagatcatcccgacgatgcgcaagaatccgggctatctcgccaagaaccgcatccgcatc
ctcggccccggcggcgtcgaggtcgatccgaccgcgatcgactggaacacgcagaaggcg
accaactacacgctgcgccaggattccggcctcgacaattcactgggccaagtccgcatc
gacatgccgaaccgccacgcgatctacatgcacgacaccccctcgaagtcgctgttcgcc
ggctcggtgcgcttccattcacacggttgtgtgcgcgtcggtcaggtgaaggagttcgcc
gcctggctgctccaaggcaccgaggggccgaacgggccgggctccgcctggggaccgatc
gagatcgagaccgccatcgccgtcggcgagcggcgcgacgcgaagctcgtgaagccgacg
cccgtcgccttcgtctacctgaccggctacgcgacctcggacggccgggtgcatttccgc
gacgacatctacggcctcgacacgccacccgcgccggccgcggcgacgccgctcaccccc
gatgtgacgaccaccggcgccatcacgccccgcacggcgccggcaccccgcccggccgca
ccgggcgtcgcgccgcgtcccctgccgtccacggcgcagggggcgcccgttaggccggcg
ccggtcaagcccgcaccggtcggggccgctccgacgccggcgcccgcgaccgccttgccc
gctccgccgaagccgcaggcccggaaagccgcgccgcccacacgcgggccggagagcgag
ccggtcccgatgccgcccggcctcgtcggcgggcggggctga
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