Methylobacterium sp. AMS5: Y590_25725
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Entry
Y590_25725 CDS
T04283
Name
(GenBank) DNA polymerase III
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
meta
Methylobacterium sp. AMS5
Pathway
meta03030
DNA replication
meta03430
Mismatch repair
meta03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
meta00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Y590_25725
03430 Mismatch repair
Y590_25725
03440 Homologous recombination
Y590_25725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
meta03032
]
Y590_25725
03400 DNA repair and recombination proteins [BR:
meta03400
]
Y590_25725
Enzymes [BR:
meta01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Y590_25725
DNA replication proteins [BR:
meta03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Y590_25725
DNA repair and recombination proteins [BR:
meta03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Y590_25725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
UDG
Motif
Other DBs
NCBI-ProteinID:
AMB48372
LinkDB
All DBs
Position
pAMS5a:complement(106836..110240)
Genome browser
AA seq
1134 aa
AA seq
DB search
MHAILAARSNFSIGESINDIGKLVKQAAELGSKAIALTDTMSVTGLPELTTKAKAAGIKP
IIGARLRLVDDITWRKTKDDKKAPAEFFVTYYVLSGAGLMGLYKLLSLANDEDHFYNNAK
LSFADLYSVLDTLTADDVAIASSDAYSVGTHADAQSILQRIADAVTRENVFLTLTPIHTP
YWDTVNTRAIELANTLGLPLLTTIPSLYPEGGADATDVMNAIRRNVKMDEPWAYINAARD
MHPRSLKGLVELCKESQRRLVEFRGVKGAGGAFLQGLKNTETLVSKVTYEWQKFAPSLPV
MAPDEFAAVVTECKKGWSKRFGAQVFGHRPSLDELKEVYTPRLKYELSVLKNLKFCGYFL
LVQDVVQFAKGAGIAVGPGRGSVGGSLIAYLMGITDCDPIRFGLLFERFINPERLDLPDA
DLDFMSARRHEVFTYLINKYGAKRVAGVSNFLKLGASSAIRGVSKSFRLPEDDYRCSKFV
PKKHGQPVKLVEAIKEVPEIADWASKNPFLAKTAGELEGCMSALGQHAAGVVVAGCDLVE
RAVIERRKAPAKPKEGEEEVPELPVVCWDKRIVEDQGLVKMDILGLNTLDLIEATRDYIR
KRRGKTVDLLRIPLDDPKVLENFAKAISTGIFQFEGGGMRRLLKELGKDGTICFDDITAA
TALYRPGPMESGMMDSYWKRKQGIEEVEYDHPLMEPILKPTFGVMVYQEQVMQISQVIAG
YTGPQADKLRKIMGKKLPEEMAKERGKFVQGCVDTVKQDANWAGALFDKIEGFAGYGFNK
SHSVEYTLISYQAMYLKTYYAVEFFAAALSQMGQDKLPGLMKDAERMGIEVDLPDINHST
GQFEIVTDARLCMPFNRIKGISANTTDAILKARAAGPFKSMQDLTDRVERRRCNVRHVET
LNKVGAFARIEPGQLPAKHDSRVKDQRELLPGLITAHVPIAREMDIGSFEKAKIITLVAD
YCDGHHDDGMPVKPTIGRKARFMVITDCPAKGEDESGFMSFLGSKTGGTMNEWIKAALDA
ADLQRQDAYWTALIKRPKEGKQVSPKEITAYSPYLMKEIEILKPPCIVLLGSSTVRHFIP
DFKGKASEFAGEVVYSKALDANLVIGFAPGEIFFEPAKQAKLDEVFAVAASLTE
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atgcacgcgatcctggccgcccggtccaacttctcgatcggcgaatccatcaacgacatc
ggcaagctcgtgaagcaggccgcggagctcggctccaaggccatcgcgctgaccgacacc
atgtccgtcacgggtttgcccgagctgacgacgaaggcgaaggcggccgggatcaagccg
atcatcggcgcccgcctgcgcctggtcgacgacatcacctggcgcaagacgaaggacgac
aagaaggctccggccgagttcttcgtcacctactacgtgctctcgggcgcgggcctgatg
gggctctacaagcttctgtcgctcgccaacgacgaggaccatttctacaacaacgccaag
ctgtcgttcgctgatctctattcagtgctcgacacgctcactgcggatgacgtcgcaatc
gcgtctagcgacgcatacagcgtcggaacgcatgctgacgcgcagagcatcttgcagcgc
atcgctgacgctgtgacgcgcgagaacgtgttcctcacgctcacgcccattcacacgccc
tactgggacacggtgaacacgcgcgcgatcgagctggcgaacacgctgggcctgccgctg
ctcacgacgatcccgagcctctatcccgagggcggggccgacgcgaccgacgtcatgaac
gcaatccgccgcaacgtgaagatggacgagccctgggcctacatcaacgcggcgcgcgac
atgcacccgcgctcgctcaagggtctcgtggagctctgcaaggagagccagcgccggctc
gtggagttccgcggcgtgaagggcgcgggcggggccttcctccagggcctcaagaacacc
gagacgctggtctccaaggtcacatacgagtggcagaagttcgcgccctcgctgccggtg
atggcgcccgacgagttcgcggctgtcgtgaccgagtgcaagaagggctggtcgaagcgg
ttcggcgcgcaggtcttcgggcaccggccgagcctggacgagctcaaggaggtctacacg
ccgcggctcaagtatgagctgtccgtgctcaagaacctcaagttctgcggctacttcctg
ctcgtgcaggacgtggtgcagttcgccaagggcgccggcatcgccgtcgggcccggccgc
ggctccgtgggtggctcgctgatcgcctacctgatggggatcaccgactgcgatccgatc
cgcttcggtctcctgttcgagcgcttcatcaaccccgagcgtctcgaccttcccgacgcc
gacctcgacttcatgtcggcgcggcgccacgaggtcttcacctacctcatcaacaagtat
ggcgccaagcgcgtcgcgggcgtgtcgaacttcctcaagctcggcgcctcgtcggccatc
cgcggcgtgtcgaagtccttccgcctgcccgaggacgactaccgctgctcgaagttcgtg
cccaagaagcacggccagcccgtcaagctcgtcgaggcgatcaaggaggtcccggagatc
gccgactgggcgagcaagaacccgttcctcgccaagacggccggcgagctcgaaggctgc
atgtcggcgctgggtcagcacgcggccggcgtcgtcgtggccggctgcgatctggtcgag
cgggcggtgatcgagcgtcgcaaggccccggccaagcccaaggagggcgaggaagaggtt
ccggagctgccggtcgtctgctgggacaagcgcatcgtcgaggaccagggcctggtcaag
atggacatcctgggcctgaacacgctcgacctgatcgaggccacgcgcgactacatccgc
aagcgccgcggcaagacggtcgacctgctgcgcatcccgctcgacgatccgaaggtgctg
gagaatttcgccaaggcgatctcgacaggcatcttccagttcgagggcggcggcatgcgg
cgcctgctgaaggagctcggcaaggacggcacgatctgcttcgacgacatcacggccgcg
accgcgctctaccgtccgggtccgatggaatcgggcatgatggacagctactggaagcgc
aagcaggggatcgaggaggtcgaatacgaccacccgctcatggagccgatcctcaagccg
accttcggcgtgatggtctaccaggagcaggtcatgcagatctcccaggtgatcgccggc
tacacgggtccccaggccgacaagctgcgcaagatcatgggcaagaagctgcccgaggag
atggcgaaggagcgcggcaagttcgtccagggctgcgtggatacggtcaagcaggatgcc
aactgggcgggcgcgctgttcgacaagatcgagggcttcgccggctacggcttcaacaag
tcgcactcggtcgaatacaccctgatctcctatcaggccatgtatctgaagacctactac
gcggtggagttcttcgcggctgcgctgtcgcagatgggtcaggacaagctgcccggcctg
atgaaggacgccgagcggatggggatcgaggtcgacctgcccgacatcaaccactcgacg
ggccagttcgagatcgtgaccgatgcccggctctgcatgcccttcaaccggatcaagggg
atctcggccaacacgacggacgcgattctgaaggcgcgcgcggccgggccgttcaagtcg
atgcaggacctgaccgaccgggtggagcggcgtcgctgcaacgtccggcacgtcgagacg
ctgaacaaggtgggcgccttcgcgcgcatcgagcctggtcagctgccggccaagcacgac
agccgggtcaaggatcagcgcgagctgctccccggcctcatcacggcgcacgtcccgatc
gcgcgcgagatggacatcggctccttcgagaaggctaagatcatcacgctggtcgcggat
tactgcgacgggcaccatgacgacggcatgcccgttaagcccacgatcggccgcaaggcc
cggttcatggtcatcaccgactgcccggccaagggcgaggacgagagcggcttcatgtcg
ttcctcggctcgaagacgggcggcacgatgaacgagtggatcaaggccgcgctcgatgca
gccgatcttcagcggcaggacgcctattggaccgccctcatcaagcggcccaaggagggc
aagcaggtctccccgaaggagatcaccgcctactcgccctacctgatgaaggagatcgag
atcctgaagccgccctgcatcgtgctgctcggctcctcgaccgtccggcacttcatcccc
gacttcaagggcaaggcgtccgagttcgcgggtgaggtcgtctattccaaggctctcgac
gccaacctcgtgatcgggttcgctccgggtgagatcttcttcgagcccgccaagcaggcc
aagctcgatgaggtcttcgctgtcgccgcgtcgcttaccgagtga
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integrated database retrieval system
