Methanosphaera sp. BMS: AW729_00060
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Entry
AW729_00060 CDS
T05504
Name
(GenBank) endonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
metb
Methanosphaera sp. BMS
Pathway
metb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
metb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AW729_00060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
metb03400
]
AW729_00060
Enzymes [BR:
metb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
AW729_00060
DNA repair and recombination proteins [BR:
metb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
AW729_00060
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
AWX31570
UniProt:
A0A2Z4L5W5
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All DBs
Position
complement(9444..10277)
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AA seq
277 aa
AA seq
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MFTIGPHLSINKGFENIGLEAISIDANTFQFFPRSPRGGKAKELDFDDIARFEDVRNNSD
IDVILAHAPYVINLASKSEKTRQNAYELFEDDLRRLSHLPKNMYNFHPGSHVGQGVDKGI
EFISDSLNKLITEELKTTILLETMAGKGTEIGRSFEELQSIIEAVEMDEKLCVCLDTCHV
YDAGYDIVNDLDGVLDEFDSIIGLDRLKAIHLNDSMYGLSSHKDRHEKIGDGKIGLDAIT
SIINHEKLRKLPFFLETPNDIEGYKDEIKLLRELYED
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgtttacaataggtccacacttatcaattaataaaggttttgaaaatataggattggaa
gctataagtattgatgccaacaccttccagttctttcccagaagtccacgtggcggcaag
gccaaagaattggattttgatgacatagccaggtttgaggacgttagaaacaacagcgac
attgacgtgatacttgcccatgcaccatatgtgataaatcttgccagcaaatcggaaaaa
accagacaaaatgcctacgaattatttgaggatgacttaagaaggctaagccacctgcca
aaaaacatgtataactttcatccgggaagtcatgtaggccagggagtggataagggtatt
gagtttattagcgattcgttgaataaattaattacagaggaattaaaaaccacaatactg
cttgaaaccatggctggtaagggtactgagattggaagaagctttgaagaactgcaatcc
atcatagaagctgttgagatggatgaaaaactatgcgtatgtcttgatacatgccacgtc
tatgatgcaggatatgatattgtaaatgacttggacggagttcttgatgaatttgacagc
atcattggacttgataggcttaaggcaatccaccttaatgacagcatgtatggattatcc
agccataaggatagacatgaaaaaatcggtgacggtaaaatcggtttggatgccattaca
tccatcatcaaccatgaaaaactaagaaaactgccattctttttggaaactcctaatgat
attgaaggatacaaagatgagataaagttacttagagaattatatgaagattaa
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