Methanosphaera sp. BMS: AW729_00410
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Entry
AW729_00410 CDS
T05504
Symbol
tfb
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
metb
Methanosphaera sp. BMS
Pathway
metb03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
metb00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
AW729_00410 (tfb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
metb03021
]
AW729_00410 (tfb)
Transcription machinery [BR:
metb03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
AW729_00410 (tfb)
Prokaryotic type
Archaeal type
TFB
AW729_00410 (tfb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Sigma70_r4
RB_B
PWI_Topors
A2L_zn_ribbon
zf-POGZ
Ribosomal_S27e
Motif
Other DBs
NCBI-ProteinID:
AWX33575
LinkDB
All DBs
Position
complement(128483..129394)
Genome browser
AA seq
303 aa
AA seq
DB search
MENNNKNELSCLECGSTKPIIDHKLKEIVCGFCGFVMAYNSDDNGHEWGAFDHEQRDKCT
SDDAPITDTINDNGLSTMMDGSNKDIYREDMPSRNRAQWYRLRKLQRKISKNSDTESLAF
ALSELGLYSSRLGLPRSVRESASTIYINAVENNLIRDRSIEEIIAASLYLACRRCQEPRT
LDEIVEVSRVSKKEVGRTFRFLTRELHIILPSISPIDYVPRFSSELNLSDNVQSTAIEII
NEAIQNGLTIKHGPTGVAAAALYIAGLLHGEGKPLCDVADIAGVTEVTIRNRFHEITEHL
ILD
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atggagaataataataaaaatgagctttcctgtcttgaatgtggttcaactaaaccaatc
attgaccataaactgaaagaaattgtctgtggattttgtggctttgtaatggcttataat
tcagatgataatggtcatgaatggggagcatttgaccatgaacaaagggacaaatgtacg
agcgatgatgctccaataacagacacaattaatgataacggattatccacaatgatggac
ggatctaacaaggatatctatagagaggatatgccttcaagaaacagggcacaatggtac
aggttaagaaaattgcaacgtaaaataagcaaaaatagtgatacagaaagcctggcattt
gcactaagtgaattaggcctttactcatcaagacttggacttccaagatcagttcgtgaa
tcagcatccacaatatatataaatgctgttgaaaacaatcttatcagagatagaagtatt
gaagaaataattgcagcatccctttatctagcctgcagacgatgtcaagaaccgagaaca
cttgatgagatagtggaggtgtcacgtgtaagtaagaaagaagtgggtagaacattcaga
ttcctgacaagagaattgcatattatactaccttcaataagtcccatagattatgttcca
agattttcaagtgaattaaacttgtctgataatgttcaatccacggctattgaaataatc
aatgaagctattcaaaatggactaacaattaaacatggtcctacgggagttgctgctgct
gcattatatattgcaggtttactccatggtgaaggaaaaccactgtgtgatgtggcggat
atagcaggtgttacagaagtcacgatacgtaacaggtttcatgagattactgagcatttg
atattggattaa
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