Methanosphaera sp. BMS: AW729_00865
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Entry
AW729_00865 CDS
T05504
Symbol
tfb
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
metb
Methanosphaera sp. BMS
Pathway
metb03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
metb00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
AW729_00865 (tfb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
metb03021
]
AW729_00865 (tfb)
Transcription machinery [BR:
metb03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
AW729_00865 (tfb)
Prokaryotic type
Archaeal type
TFB
AW729_00865 (tfb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Zn_ribbon_LysW
Ribosomal_S27e
Zn_ribbon_PaaD
Cyclin_C
Sigma70_r4
HTH_Tnp_ISL3
DUF3797
A2L_zn_ribbon
BRF2-like_C_cyclin_rpt
Zn_ribbon_5
Trm112p
Auto_anti-p27
Zn_ribbon_3
Cas12f1-like_TNB
Zn_ribbon_tTFIIB
Lar_restr_allev
GATA
Motif
Other DBs
NCBI-ProteinID:
AWX33577
UniProt:
A0A2Z4LBE5
LinkDB
All DBs
Position
complement(258888..259823)
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AA seq
311 aa
AA seq
DB search
MKKDVVEMEKKESKCPECGSTHLINDSEHGEIVCGACGIVLDDNIVDMGPEWRAYDHEQR
DKLTRVGAPITYTIHDKGLSTMIDWRNKDSYGREIPTENRAQWYRLRKWQRKSRISGATE
RNLAFALGEMDRESSRLELPRSIRESASVIYRNAKAKDLIRGRSIEGVVAASLFVACRRW
KILITLNEIAGVSSLTKPEINKTYKFIARELGIKLPIFTPMDYVPKFASKMNLSGEVQAK
AINLIIEARENGLISGSNPTGVAAAAVYIASHLLGERKSQHDVADIADISEATIRKRYNE
LNKILNIQVDT
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaagacgttgtggagatggagaaaaaggaaagcaaatgtcctgaatgtggatcc
acacatttgataaatgattccgaacatggcgaaattgtgtgtggtgcatgtggaatagta
ctagatgacaacattgttgatatgggtcctgaatggagagcatatgaccacgaacagagg
gacaaacttacaagagtaggtgccccaattacctacaccatacacgataaaggattgtcc
accatgattgactggcgtaacaaggacagctatggaagagaaattccaacagaaaacagg
gcacaatggtacaggctaagaaaatggcagcgtaaaagtagaatcagtggagctactgaa
agaaaccttgcattcgctctcggtgaaatggatcgtgagtcttcacgactggagcttcca
agatcaattcgtgaatcagcgtcagtaatatatcggaatgccaaggcaaaagatctgatt
agaggaagaagtatagaaggggtagttgccgcttcattatttgtagcatgcagaagatgg
aaaatattaataacccttaatgaaatagccggcgtttcaagtttaaccaaaccagaaata
aataaaacatacaaattcattgcaagggagttaggcataaaacttccgattttcactcca
atggattatgttccaaaatttgccagcaaaatgaatctctcaggtgaagttcaagccaag
gcaataaacttaatcattgaagccagggaaaatggtttaataagcggtagtaatcctaca
ggtgtagctgcagccgcagtatatatagccagtcatcttctcggtgaacgtaagagccag
catgatgtcgctgatatagcggatataagtgaggccactattcgtaaaaggtataatgag
ttaaataagatattaaatattcaagtggatacttaa
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