Methanosphaera sp. BMS: AW729_00945
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Entry
AW729_00945 CDS
T05504
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
metb
Methanosphaera sp. BMS
Pathway
metb03420
Nucleotide excision repair
metb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
metb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AW729_00945
03430 Mismatch repair
AW729_00945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
metb03400
]
AW729_00945
Enzymes [BR:
metb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AW729_00945
DNA repair and recombination proteins [BR:
metb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AW729_00945
MMR (mismatch excision repair)
Other MMR factors
AW729_00945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_11
AAA_30
ResIII
DEAD
Dna2
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
AWX31738
LinkDB
All DBs
Position
complement(281205..284471)
Genome browser
AA seq
1088 aa
AA seq
DB search
MKNLYEVNIIYKTKDKTIILIYVSTMSEVIPKKKLNDEQKDAVKYDGKSLLISAGPGAGK
TFVLIERIKYLLREKNVNPESILVITFTRKAADQLRQRLSKDDEIDEGTVNKMFINTIHS
FCINFLSENGCSDINLLESENNNERKLMFLRKHKKNLGFTREAHMSGKNLHAVVDKFNEY
TTFNVKTPELVEYIQENRPVSQEYKDLIASCGEGDDFEYPYDEVRNDEELRESQYNARYL
AIAKAYPEYINLLEQETSYDFNYLQVKVMDILKNNESIAKNSRFKNILIDEYQDIDPIQN
NIFTALSKYSDSFTVVGDDDQSIYAFRGSVPKYFTDFADNISKENNPHKSSVKKLSTNFR
SCPEVVEYNEELICDDREIEKNLIPDREDKGGVYYLINDDNKTQAEKIAKIILHLRQSDK
IKQYSDVALLMSSVKYSKGINEILETFNNCNIPYNLSENESLMSNPEVKAMIILLWYMKE
DSDKIILSSWEKDWLNLSAFSQVQDILNLDDTTCQILADIEERYQENILEAEKEVYKELT
GKTSRLKTFKGVFNRDDEIVEEVLNKVERFDLSSKTRNDLEELGITNKHDLDLFENLYNI
KEKLYDANTEFYEKPSILEIYYDILQYSGILENRLENPTEDNERILRNLGQITETISNYE
EIVTKYSINGLLWFIFQEFDNYATSTIESDSIDKVQIMTVHKSKGLEFPVVIIGSIMEDK
FPKHTDICVEAEKNYVHGSPTYYTPLEYLEYKQKAYHIENDTVTEDDVIEEENKEAKRVF
YVATTRAEDILILSSIKDNEGNVPKIMESTIDDDRYQEITDNYNDLVETQAKEKEPEKER
LKLSYTHLSEYDNCAQEYNLRYNYQFKNSKNKALTFGQVAHTILNLIHQKQIRYQKEGQG
QVTSNEEIKEIIEQVKLFNQNLENNENDEFKEIEQSIYTYWDENKDKYEIIGSEVPFSIT
YDDYDLEGKIDLIVKDKNSDDITIIDFKTTNERNSQILTDRYHKQLFTYAMAIRKLPEYD
KYNIKEVMIYSVKYSQAIPIAITDLNITDVEKSINNTVDKILDGNFIMCSDDSRCFNCEY
NKSICRRK
NT seq
3267 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacttatacgaagttaacatcatatataaaactaaagataaaacaattatttta
atatacgtgagtacaatgtctgaagttatacctaaaaaaaagttaaatgatgaacagaaa
gatgccgtaaaatacgatggaaaatccttgctgattagtgcaggtcccggtgcaggtaaa
actttcgtattaatagaaagaatcaaatatttgctacgagaaaaaaatgtcaatccagaa
agcatacttgtaattacattcacaagaaaagctgccgatcaattaagacaaaggttaagt
aaagatgatgaaatcgacgaaggcactgttaataagatgtttataaataccatccactca
ttctgtattaattttttgagtgaaaatggttgcagtgatattaatcttctggaaagtgaa
aacaacaatgaacgtaaattaatgtttctacgcaagcataaaaagaatttaggttttaca
agagaagcacatatgagtggtaaaaacttacatgccgtagtagacaaattcaatgaatac
accacattcaacgtgaaaactccggaacttgtagaatatatacaagaaaatcgtccagta
tcacaggaatataaggatttaattgccagttgtggtgaaggtgatgattttgaataccca
tatgatgaagtaagaaacgatgaagaacttagggaaagtcaatacaatgcaagatacctg
gcaatagcaaaggcatatcccgaatacattaatttattagagcaagaaacatcatatgac
tttaattacttacaagttaaagtaatggacatattaaagaataatgaatcaatagctaaa
aattccaggtttaaaaatatattgatagatgaatatcaggatatagatcctatacaaaat
aacatatttactgctttatcaaaatattcggatagctttacagtggtaggtgatgatgat
cagagtatttacgctttccgtggcagtgtacctaaatatttcactgactttgcagataac
atcagtaaagagaacaatccccacaaatcatctgtgaaaaaattatcaactaatttcagg
tcatgtccggaagtggtagagtataatgaagaattgatatgtgatgatagggaaattgaa
aaaaatctcatccccgatagagaagataaaggaggagtgtattacttaataaatgatgat
aacaaaactcaagcagaaaaaatagcaaaaataattcttcatctacgtcaatccgataag
attaaacaatacagtgatgttgcacttctaatgtcatctgtaaaatatagtaaaggaata
aatgagatacttgaaacattcaacaactgcaatatcccatataatttatctgaaaatgaa
tcacttatgagtaatccagaagttaaagccatgataatcctattatggtacatgaaagaa
gatagtgacaagattatcttaagcagttgggaaaaggattggttaaacttaagtgcattc
agtcaagttcaggacatattaaacttggatgacacaacctgtcaaatacttgcagatatc
gaagaaagataccaggaaaatatattggaagcagaaaaggaagtctataaagaattaact
ggcaagacaagtagattgaaaacatttaaaggtgtgttcaatagggatgatgagattgta
gaggaagtattaaataaagttgaaagattcgatttaagtagcaagacaagaaatgattta
gaagaacttggcataacaaataaacatgatttagacctgtttgaaaacttatataatatc
aaagaaaaattatatgatgcaaatacggaattctatgaaaaaccatcaatcctagagata
tattatgacatattacaatattccggaattctagaaaaccgtttggaaaatcctacagaa
gacaacgaaagaatactcagaaacctaggacaaataacagaaacaatatcaaattatgaa
gaaatagttacaaagtatagtataaatggattgctatggttcatattccaggaatttgat
aactacgccacatcaacaatcgaatccgatagtattgacaaagtacagattatgaccgtg
cataaatccaaaggactggaatttcctgtagtaataatcggatcaatcatggaagataaa
ttccccaaacataccgatatctgtgtagaagctgaaaaaaattacgtccatggtagtcca
acatattacacaccactggaatatcttgagtataaacaaaaagcgtaccatatagaaaat
gatacagttactgaagatgatgtaatcgaagaagaaaataaggaagcaaaaagagtattc
tatgttgcaacgacaagagcagaggacatactgatattatcttcaatcaaagacaacgaa
ggaaatgtaccaaaaataatggaatcaacaatagacgatgacagataccaagaaataaca
gataattataatgacttggtagaaacacaggctaaagaaaaagaacctgaaaaagaacga
ttaaaacttagttatacccatttatcagagtatgataactgtgcacaggaatataatctt
agatataattaccaatttaaaaattcaaaaaataaagcattgacatttggacaagtggcc
cacacaatacttaaccttatacatcaaaaacaaatcagatatcaaaaagagggacaagga
caagtaacaagcaatgaagaaattaaagaaatcatagaacaagtaaagttatttaatcaa
aatctagaaaacaatgaaaatgatgaatttaaagagatagaacaatcaatatacacttat
tgggatgaaaacaaagacaaatatgaaataataggttcagaagtgccattttccattacc
tatgatgattatgatcttgaaggaaaaatagatttaattgttaaagataaaaatagtgat
gatataacaattatcgactttaaaaccacaaatgagagaaatagccaaatattaacagac
agataccataaacaattatttacttatgcgatggcaataagaaaactacccgaatacgac
aaatacaatatcaaggaagtcatgatttactccgttaaatattcacaagccatacctata
gcaattactgatttgaacattactgatgttgaaaaatccataaacaatactgttgataaa
atattagatggaaatttcatcatgtgcagtgatgacagcagatgtttcaattgtgaatac
aacaaatcaatatgtcgaagaaaataa
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