Methanosphaera sp. BMS: AW729_01470
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Entry
AW729_01470 CDS
T05504
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
metb
Methanosphaera sp. BMS
Pathway
metb03420
Nucleotide excision repair
metb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
metb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AW729_01470
03430 Mismatch repair
AW729_01470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
metb03400
]
AW729_01470
Enzymes [BR:
metb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AW729_01470
DNA repair and recombination proteins [BR:
metb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AW729_01470
MMR (mismatch excision repair)
Other MMR factors
AW729_01470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
TPR_14
AAA_12
TPR_12
TPR_2
TPR_8
TPR_16
TPR_19
Dna2
AAA_11
Cu_bind_like
TPR_1
ResIII
TPR_CcmH_CycH
TPR_11
HEAT_Nup120
Motif
Other DBs
NCBI-ProteinID:
AWX31838
UniProt:
A0A2Z4L6N8
LinkDB
All DBs
Position
456534..460634
Genome browser
AA seq
1366 aa
AA seq
DB search
MVKLDEYQIKAVTYDEPFKLLVPAGPGAGKTRVLIERVKYLLENGAKPESFLIITFSREA
ANELKERLSDSKDGIDIHEVNKMQISTIHSFCNELLRESGKSGFNILDDDFDERKSMFIR
RYRDELGLKREARISGSKLGSVIKKFNEYSTFNVNTPKLTEYIRENYPVSQEYLDLIASC
GEGKDFEYPYEDIFADEELRTSASNAQYLAVAEAYPKYLELLEENNYLDYNQLQIKTLEL
LEENPDIALNSRFKNILIDEFQDTDPIQMRIFKHFMDDYESFTIVGDDDQSIYGFRGSVP
DYFTNFIKKYGADEQILINNYRSGKEIVEFNEEYIQPYRGMDKELKAANTFDSAVYSLPY
KNKDEQGYNIASLIKYLKNSGKLKSYNDVGILMRSVNNDALTSIIRELKKEDIPFDMPVS
TSITDCDEVKAIITLLWYLKSDGDKYIPTKWEQNWLNLTCFDNPYFKLTDNTIEILKNKE
CEYQQKVLEVARRIYQENNVEIESLDSYNEIFKQEHALRDQIFEEAGRPFTLGHMTMDEM
VDLGISDEEDLKFFGYLNYLKENQESANKDKSTLLEVYYLLLDMLGITENRFEQENEENT
RILLNLALLSQTIANYEEIEWKHDLNGLFWYMSANLDKRTTPEIKEERDAVQIMTIHKSK
GLQFEVVIVGNITRTYNDIKDLDKKAQEEPKTWDSFLHQPTFPTPIEYLKYKDGTRRDEL
IRECLEEKRILYVAMTRAKRILVLSDWVYKNDNPASEVIKQMKEKIPAFKDLTSDNYEDL
PLAYDFEESTDDTPKEETIDISYTSFSDYRQCPHDYNVKYNYGFRSTPNEYVLMGTIAHG
IVDQIHQRHINGQEVTDDVIDEIFAKTEHYNRNIDPEDHEYQLVKEAIHKYWDEDGKTWD
IMASEYPFHVIKTGYNLTGKIDLIVKEGNDITVIDFKTTEKPIKEADKKKYLEQLSIYAI
ALREDPQYKDYNIKKGIIYTIKNNKQYHFDLTDEIIFNMEKEIEETVEKIKNHEYPRCNK
ANCQSCNRFKTLSSFEDIIEMIKSEFNGDRQHDRQIIQQAMHDYAAHAYGEEIIRELGRM
LWDYLTPEEQEEFKKAVDTDQPIVGMLNDVISHINESKSDEALDILENFLKKYPRTFSDD
NVNEYHSFNNPIEEVLFMKYIQPEKEVRIIPPNAPWFDVYYIYGRLLVEHERTDEAIKIF
KEALKINPVSTATLLMLAQLHEKDLQEYFKYSMESLKYAYQYQEVAESYRKIADCFYRKE
KYELAVAIYLNSMFFESIIPKEVEEIESKGYDVNFTEEEIITKLAESGVPPRGNPEVVKT
IKDLAEECEAHKDYEAARFFYTKLLNMTYETELMEKLGQLEELMKK
NT seq
4101 nt
NT seq
+upstream
nt +downstream
nt
atggtaaaactagatgaatatcagataaaagcagtaacatatgatgaaccattcaaatta
ctggttccagcaggtcccggtgcaggaaaaacacgtgtattaatagaacgtgtaaagtac
ttactggaaaatggtgcaaagccagaatcattcttaattataaccttctccagagaggca
gcaaatgagttaaaagaaagattaagtgacagtaaagatggtattgacattcatgaagta
aacaagatgcaaatcagtactattcacagcttttgtaatgaactcttaagagaatcagga
aagagtggatttaacatattggatgatgactttgatgaaagaaaaagtatgtttatcagg
cgatatcgtgacgagcttggattaaaacgtgaagcacgtataagtggaagtaaactaggt
agtgtaataaaaaaattcaatgaatactccacattcaatgtaaacacgcctaaattaacc
gagtatatcagggaaaattatcctgttagccaggaatacctggacttaatagccagctgt
ggtgaaggaaaggactttgaatacccatatgaggacatatttgccgatgaagaactacgt
acaagtgcatccaatgcccagtatctagcagtggcagaggcatatccaaaatacttggaa
ttattggaagaaaataattatcttgactataatcaactacagataaaaacactggaatta
ctcgaggaaaatccagatatagcactaaacagtcgattcaagaacattctcatcgacgag
tttcaggatactgaccctatacagatgagaatattcaagcatttcatggatgactatgaa
tcatttaccatagtgggagatgatgatcaaagtatttatggattccgtggaagtgtacca
gattactttacaaatttcataaaaaaatatggagcagatgaacagatcttaataaacaac
taccgctcaggtaaagaaatagttgaatttaacgaagaatacattcaaccataccgtgga
atggacaaagaattaaaagcagcaaatacatttgatagtgctgtttactcattaccatat
aagaataaggatgaacagggatataacattgcaagtctgataaaatatcttaaaaatagt
ggaaaactcaagtcttataatgatgtgggaatattaatgcgttctgtaaacaatgatgca
ttaacttctattatcagggaacttaaaaaagaagatattccattcgacatgccggtttca
acaagtataactgactgtgatgaagtaaaggcaatcataacactattatggtacttaaaa
agtgacggtgataaatacataccaacaaaatgggaacaaaactggcttaatttaacatgt
tttgataatccatacttcaaattaactgataatacaatagaaatattaaaaaacaaggaa
tgtgaatatcaacaaaaagtcttggaagtagcacgtagaatatatcaggaaaataatgta
gaaatagaatcattagactcttataatgaaatatttaaacaggaacatgctctaagagat
caaatatttgaagaagcaggaagaccatttacactaggacacatgactatggatgaaatg
gtagacttgggaataagtgatgaagaagaccttaaattctttggctatcttaactatctt
aaagaaaatcaagaatcagccaacaaagataaaagcacactacttgaagtatactactta
ctgttggatatgctaggcataacagaaaatcgattcgagcaagaaaacgaggaaaacacg
agaatattattaaaccttgcactgcttagccaaaccatagcaaactatgaagaaatagaa
tggaaacatgatttaaacggattattctggtatatgtctgcaaatcttgataaaagaaca
acgcctgaaataaaagaagaacgtgatgcagtacaaataatgacaatacacaaatccaaa
ggacttcaatttgaagtagtaatagtaggaaacatcacacgtacctacaatgatataaaa
gatttggataaaaaagctcaggaagaaccaaaaacatgggatagtttccttcatcagcca
acatttccaaccccaatagaatacctgaaatataaggatggaacaagacgggatgaatta
ataagagaatgcctggaagaaaaaagaatattatatgtggcaatgactagggctaaaaga
atactcgtactatccgattgggtttataaaaatgataatccagcatcagaagttataaaa
cagatgaaagaaaaaatacctgcatttaaagacttaacatctgataactatgaagatctt
ccactagcatatgactttgaagaaagcacagatgatacacctaaagaagaaactattgat
ataagttatacaagcttctcagactacagacaatgtccacatgactataacgttaaatat
aactatggattcagaagtacaccaaacgagtacgtactcatgggaacaatagcacatgga
atagtcgaccagatacaccagaggcatatcaacggtcaagaagtgacagatgacgtgata
gatgaaatatttgccaagacagaacattacaatcgtaacatagaccctgaagaccatgaa
taccaactggttaaagaagccatacataaatactgggacgaggatggaaaaacatgggat
ataatggcatcagaatatccattccacgtaataaaaacaggctacaacctaaccggaaaa
attgacttaatagtcaaggaaggcaatgatattacagtaatagactttaaaacaacagaa
aaaccaataaaagaggccgataagaagaagtatctggagcaactaagtatctatgcaata
gcactacgagaagacccacaatacaaagactacaacatcaaaaaaggaataatctacaca
ataaaaaacaacaaacaataccactttgacctaacagatgaaataatattcaacatggaa
aaagaaatagaggaaaccgtagaaaaaataaaaaaccatgaatatccacgctgcaacaag
gccaactgccagtcatgcaaccgttttaaaacactatccagtttcgaggatataatagaa
atgataaaatccgagtttaatggtgacaggcaacatgaccgacagattatacaacaggca
atgcatgactatgcagctcatgcatatggagaggagataatcagggaactaggacgaatg
ctatgggactacttaactccagaagaacaggaagaattcaaaaaagcagtagatacagat
caaccaatagtcggcatgttaaatgatgttatcagccatatcaatgagagtaaaagtgat
gaagcattggatatactggaaaacttcctaaaaaaatatccaagaacattctctgatgat
aatgtaaatgaatatcatagcttcaacaatccaattgaagaagtcctatttatgaaatac
atccaacctgaaaaagaagtaaggataataccaccaaatgcaccatggtttgatgtatac
tatatctatggaagactactagtagaacatgaaaggaccgatgaagcaataaaaatcttt
aaagaagcactaaaaataaatccagtttcaacagcaacactactaatgctcgcacaacta
catgaaaaagacctacaagaatacttcaaatactcaatggaatccttaaaatatgcatat
caataccaagaagtagcagaaagctaccgaaaaatagcagattgcttctacagaaaggaa
aaatatgaattagcagtggcaatatacctaaatagcatgttttttgaaagtataatacca
aaagaagtagaagaaatagaatccaaaggatatgatgtaaactttacagaagaagaaata
ataactaaactagccgaaagtggtgtgccaccacgtggaaatccagaggtagtaaaaaca
atcaaagacttagcagaagaatgtgaagcacataaagactatgaagcagcaagattcttt
tataccaaactcttgaacatgacctatgaaacagagctaatggaaaaactaggacaactg
gaagaattaatgaagaaataa
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