Methanosphaera sp. BMS: AW729_01720
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Entry
AW729_01720 CDS
T05504
Name
(GenBank) H/ACA RNA-protein complex component Cbf5p
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
metb
Methanosphaera sp. BMS
Brite
KEGG Orthology (KO) [BR:
metb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
metb03016
]
AW729_01720
Enzymes [BR:
metb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
AW729_01720
Transfer RNA biogenesis [BR:
metb03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AW729_01720
Prokaryotic type
AW729_01720
BRITE hierarchy
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GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PUA
DKCLD
Pus10_C
UPF0113
Staphostatin_A
Motif
Other DBs
NCBI-ProteinID:
AWX31885
UniProt:
A0A2Z4L6E0
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All DBs
Position
539168..540133
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AA seq
321 aa
AA seq
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MNDYEYNCECDTDYNYGCRPEERSITEHIDKGIFNIDKPAGPTSHEVDLWVKNIMDVEKT
GHGGTLDPKVTGVLPVALNQATRALSLLLLLPKEYVCLMHIHKPTQPEDIISVFNEFTGK
IYQMPPVKSAVKRQLRVRSIYDVEILEIENNQDVLFRVKCESGTYIRKYCHDIGEVLGCG
AHMAELRRTVSGTFTENDSLTTLQDVTDAYYFYKNCGDEHILRELIHPMEYTTKNLKKIY
VKDSAVDAICHGANLASSGIVKLNKDINKNNTICLMTLKDELLAIGESLYSADEILSSTT
KYVVKIQKVFILPKTYPKMWK
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgaatgactatgaatataactgtgaatgtgatactgactataactatggctgcaggcca
gaggaaagaagtataacagaacatatcgacaagggcatcttcaacatcgataagccggcc
ggtccaacttctcatgaggtggacttgtgggttaagaatatcatggatgttgaaaagaca
ggtcatggcggaacacttgatccaaaggttaccggtgtgcttcctgtagcgttaaatcag
gcaacaagggcattgtcattactgttgcttcttccgaaggaatatgtatgtcttatgcat
atacataagccaacacagccagaggacatcataagtgtattcaatgaatttacgggtaag
atttatcagatgccgcctgtcaagtctgccgttaaaaggcagctgagggtacgtagtata
tatgatgttgaaatacttgaaattgaaaataatcaggacgtactcttcagggttaaatgt
gaaagcggtacatatatacgtaagtactgtcatgacattggtgaagtgctgggctgtgga
gcacacatggccgagttacgccgtaccgtaagcggtacatttactgagaatgactcattg
acgaccctgcaggatgtgactgacgcatattatttctataaaaactgtggtgatgagcat
atattgcgtgaattgattcatccaatggagtatacgacgaagaaccttaaaaaaatctac
gttaaggactccgccgttgatgcaatttgtcatggtgccaacttggctagtagtggtatc
gtcaagttgaataaggacattaataaaaataatactatttgcctgatgactcttaaggat
gaacttcttgcaataggtgaatcattatattcggctgatgaaatattgtcatcaactacg
aaatatgtggttaaaatccaaaaggtttttatactacctaaaacatatcctaaaatgtgg
aagtaa
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