Methanosphaera sp. BMS: AW729_01835
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Entry
AW729_01835 CDS
T05504
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
metb
Methanosphaera sp. BMS
Pathway
metb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
metb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AW729_01835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
metb03019
]
AW729_01835
Messenger RNA biogenesis [BR:
metb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AW729_01835
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RMMBL
Lactamase_B
Lactamase_B_2
Anti-Pycsar_Apyc1
DRMBL
Motif
Other DBs
NCBI-ProteinID:
AWX31907
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All DBs
Position
574608..575951
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AA seq
447 aa
AA seq
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MTIEVIAVGGYEEIGKNMTAVKVNDDVVIFDMGIHLDRLHIHEDTDIARMHSLDLIERGV
IPDDTLMRDVDGKVRAIVCTHGHLDHIGAIAKLAHRYEAPIIASPYTLALIEKTIQGERK
FKVNNPLKSVNPGEKIQISPNLTLEFVRTTHSIPHTITAALHTPEGVIIYANDFKFDNHQ
MVSPPPDYRRFRELGKKGVKVAILDTTNIKEKQQSKTYSERIARDLLKDVLKGPLEERKG
LIVTTFSSHIERIQAITKIAERSRRKIMLLGRSMERYCSIAESMGILNLPRNVSVYGNSK
SINKALARANENRTKYMLIVTGHQGEPDALLPRIAANKTNFEIKPGDNVIFSATTIPNPI
NIANRNLLDRRLKERGARIYNNVHVSGHAGPEDMRDFIRMLQPQHLIPAHGDLSHLSAFV
ELAEEEGYKLGNDVHILRNGQAQVFNR
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
ttgacaatagaagtaatagcagttggaggatatgaagagataggaaagaatatgactgca
gtaaaagtaaacgatgacgtggtcatatttgatatgggtatacacctagacagattacac
atacatgaagatactgacatagcaagaatgcacagtttggatttaatcgaaagaggagta
atccccgatgatacattgatgcgtgatgttgacggaaaggtacgtgcaatcgtatgtaca
cacggtcaccttgaccacataggtgcaattgcaaaactggcacacagatatgaggcacca
attattgcaagtccatatacactagcattaatcgagaaaaccatccagggcgaacgtaaa
ttcaaggtaaacaatccattaaagtcagttaaccctggtgaaaaaatacagatatcacca
aatctgaccctggaatttgtaaggacaacacacagtataccacacacaataacagcagca
ttacatacccctgaaggagtaataatatatgcaaacgacttcaaattcgacaatcatcag
atggtttcaccaccacctgactatagaagattcagggaattaggtaaaaaaggagtaaag
gttgcaatacttgatacaaccaacatcaaggaaaagcagcaaagcaaaacatactctgaa
agaatagcaagagacttactcaaggacgttctaaaaggaccacttgaagaaagaaaagga
ttgattgtcacaacattctccagtcacatcgaaagaatacaggcaataacaaaaatagct
gaaagaagcagaagaaaaatcatgcttctgggcagatcaatggaaagatactgttcaata
gcagagtcaatgggtatactaaacctgccaagaaacgtaagcgtatacggaaattcaaag
tccatcaacaaggcattggcacgtgctaatgaaaacaggacaaaatacatgctaatagta
acgggccatcagggagaacctgatgcattactacctagaatagcagccaataagacaaac
tttgaaatcaaaccgggagataatgtaatattctcagctaccacaattcctaatcctata
aacatagcaaataggaatttacttgacagacgtctaaaagaaagaggtgcaagaatatat
aataatgtccacgtatccggtcacgccggaccagaggatatgagagactttattagaatg
ctgcagccacaacacttgataccggcacacggtgacttaagccacctttcagcattcgta
gaattagcagaagaagaaggatataaattaggaaatgatgttcacatactaagaaatgga
caagcacaagtatttaataggtga
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