Methanosphaera sp. BMS: AW729_05345
Help
Entry
AW729_05345 CDS
T05504
Name
(GenBank) hypothetical protein
KO
K07456
DNA mismatch repair protein MutS2
Organism
metb
Methanosphaera sp. BMS
Pathway
metb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
metb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
AW729_05345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
metb03400
]
AW729_05345
DNA repair and recombination proteins [BR:
metb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
AW729_05345
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
AAA_14
AAA_28
HHH_5
APOBEC4_like
CPT
AAA_23
DUF3654
AAA_21
AAA_29
nSTAND3
ABC_tran
AAA
Motif
Other DBs
NCBI-ProteinID:
AWX32559
LinkDB
All DBs
Position
1540932..1542869
Genome browser
AA seq
645 aa
AA seq
DB search
MFLIYDIKEIKGVGQKLIDKIIESYGSYDEFDDAIRNYDIDPLLNIAGLSNQKALEIVRY
MHGDNIDDFLKTSQSKNIYLDIIDRLLSFTNTDYARNRILLLSPTKDYNRIESTQELIKR
TLIDTDNLDYEYIRELYSNIHELNENVRPKFNDEYAIVCEDYEDYMDLVERGFNRYCNVY
AIESQVDFNEFEFIIYVYDSFNAEPGETGNVISVSSKSPDYEIQPNIILEFFKQNKDVLE
NVYNLRKYLHMDTCIEEVLKLLDNINVNTENNVQLIDVVEEVTKKTNEVIKDEIKNVDLT
GDEVLELLNNENLPPKIMTIFDKHLEVAKDEIYERTSQYVDAFIIKYPLEIDYDELMRIE
ESANANSHLKKFEAELDTCLKLERYKQRIIDETLELIHYDYPFTLASFSKYYDLSIPSFG
EEYILEGSLHLTLKKQQKDDGILMQDIDYNLDSNNNIILLTGANSGGKTTLLETLAQHTI
MTYMGLGVCAKNAIIPKINEVYYFTKKHSLNAGAFETFLTSFIPVVIGEKNKLVLIDELE
SITELEAAIKIIIGFIEHIQDDDSYAIIVTHMAPEILKHTQNIKIRTDGIEAKGLDENYN
LIVDRSPKINYLAKSTPELILKRIYEQSDEPIKSVYKDILDKFSE
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
gtgtttttaatttacgatataaaggaaattaagggtgttggtcagaagctgattgataag
attatcgaaagctacggttcctatgatgagtttgatgatgccatcagaaactatgatatt
gacccattattgaatatagcgggactgagcaatcagaaggcattggagattgtcagatac
atgcatggagacaatattgatgattttcttaaaacgtcccagtcaaagaatatctacctt
gacatcattgatagattgctgtcatttaccaataccgattatgccagaaataggatactg
ctattaagtcccacaaaggattataacagaatagaatccacacaggaattaatcaaaagg
acattgattgataccgataatttggattatgagtatatcagagaattatattccaatatc
catgaacttaacgagaatgtccgtcccaaatttaacgatgaatatgccatcgtatgtgag
gattatgaggattacatggatttggttgaacgtggattcaacaggtactgcaatgtctat
gcaattgaaagccaggtggactttaatgaattcgagttcataatatatgtatacgacagt
tttaatgccgaaccgggagagacaggcaatgtcatcagtgtcagcagcaagagtcccgat
tatgagattcagccaaacattatacttgaatttttcaagcagaacaaggatgtacttgaa
aacgtttataatcttagaaagtacttgcacatggatacgtgtatcgaggaagtgcttaag
ttactggacaacatcaacgttaacacagaaaataatgtacagctgattgatgttgttgag
gaggttaccaaaaagacgaatgaggtcattaaggatgaaatcaagaatgttgacctgacg
ggtgatgaagtgctagagcttcttaacaatgaaaatcttccaccgaagattatgacgatt
ttcgacaagcatctggaagttgcaaaggatgaaatctatgagaggacatcccagtatgtt
gacgcgtttattattaagtaccccctggaaattgactatgatgagcttatgcgtattgaa
gaaagtgcaaatgccaacagtcatcttaagaagtttgaagccgaacttgatacgtgtctg
aagcttgagaggtataaacaaagaatcatcgatgaaacgttggagttgattcattatgat
tacccatttactcttgcatcattcagcaagtattatgacctgagtattccatcttttggt
gaggagtacattcttgagggtagccttcacctgactcttaaaaaacaacaaaaagatgat
ggcattttaatgcaagatatcgattataatcttgatagtaacaacaatatcatactactt
actggggcaaatagtggaggaaaaacaactctccttgaaactttggcacaacacacaatc
atgacctatatgggtttaggcgtatgtgccaaaaatgcaataattccaaaaatcaatgag
gtatactacttcacaaagaaacactcactcaatgcaggagcattcgaaacattcctcaca
tcattcatacccgtagtaataggtgaaaaaaacaagttggtacttatcgatgaacttgaa
tcaataacggaactagaagcggccataaaaatcataatcggatttatcgaacacatccag
gatgacgactcctatgcaataatagtaacacacatggcacccgaaatactcaagcacaca
cagaacattaaaataagaacggacggtatagaagcaaaaggattggatgaaaactacaat
ctgatagtggacagaagtcctaaaataaactatctggcaaaaagtactcctgagcttata
ctcaaaagaatatatgaacagtccgatgagcctataaaaagtgtatataaagatattctg
gataaatttagtgaataa
DBGET
integrated database retrieval system
