Methanosphaera sp. BMS: AW729_06495
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Entry
AW729_06495 CDS
T05504
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
metb
Methanosphaera sp. BMS
Pathway
metb03420
Nucleotide excision repair
metb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
metb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AW729_06495
03430 Mismatch repair
AW729_06495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
metb03400
]
AW729_06495
Enzymes [BR:
metb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AW729_06495
DNA repair and recombination proteins [BR:
metb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AW729_06495
MMR (mismatch excision repair)
Other MMR factors
AW729_06495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
AAA_30
UvrD_C_2
AAA_11
AAA_12
DEAD
Viral_helicase1
Tubulin_C
Motif
Other DBs
NCBI-ProteinID:
AWX32768
UniProt:
A0A2Z4L9H1
LinkDB
All DBs
Position
complement(1808671..1810872)
Genome browser
AA seq
733 aa
AA seq
DB search
MIDKKEFGNLIVDVLNRNIEDNLNQKEAILAPVDESQYLVAGPGSGKTTVIVLKVLKYIF
VDEVEPSKIVVTTFTNKAANELRNRTVKWAESIIGYLNLDYKFNLNDLIIGTLDSIAEEY
VSRHMDVEVIDKFTSSAIMMQTLLTNQRNNDRKLKQFFKMMKNHQGGISTSELNSQIQNL
KERLMYDMIDYTEFQKHATKEAIIYEIISDYYSQLSDRNMLDYSLLERTFYDLLTNSQTE
LLNDVEVVLIDEYQDTNYLQEQIYFKLAGRATRNGGNITVVGDDDQALYRFRGANIDLFT
SYADRIEKSLSIVPKTIFLQKNYRSTSNIIDFVNEFISLDNIYQKSRTADKPPITVNIES
SEKLPVFGMFRNNIEELSTDLSNLIYELKTDKTIYLQRNGNEYVINLGQNPSLALLANSP
KEINSFNKKRLPFYIRESLQYKDENLVVFNPRGQNIESTEIVSLFCGLLLVNIDSNSLIE
ESLDNIPPHTKKILRSWRKHTMEYMEESQSEVITTNDDKINLVELLNMVSEEVSFLTEQS
NENMIYHDIIRDTIIQTNAAINTDGYITTDQIFWHILVPIATGAIQVDDDLFDFSLEDNV
NIMSIHQSKGLEFDVVIVDVGSDIYNNQSSSAFKRFPKDGGMAYNLEKYINNTMDLSYTS
KLSGRDEAFNDMIRRYFVSYTRAKRLLILVGLSSMKDGYKGDFQDNIKIQNVATGWSRDG
KWHWDGLDNLIQL
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgattgataagaaagagtttggcaatttgattgttgatgtattgaatcgaaatattgag
gataacttgaatcagaaggaagctatattggcacccgttgatgaaagtcagtatttggtt
gccggacccggaagtggaaagacaaccgtaatagttttgaaggtattgaaatatatcttt
gttgatgaagttgaaccctcaaaaatagtagtcactacctttaccaacaaggccgccaac
gaattaagaaacaggacggttaaatgggcagaatccattataggttatttgaatttggat
tataagtttaatttaaatgatcttatcatagggactttggatagtattgccgaggagtat
gtatcaaggcatatggatgttgaagtaattgataaattcacgtccagtgccattatgatg
cagacattgcttacaaatcagcgtaataatgacagaaaactaaagcagttctttaaaatg
atgaaaaatcatcagggtggaatttcaacatccgagttaaacagtcagatacagaatctt
aaggaaagactgatgtatgacatgattgattatactgaatttcaaaaacatgctactaaa
gaagccattatctatgaaatcatctcggattattatagtcagttgtctgatagaaacatg
cttgactactcattattggaaagaaccttctatgatttgttaactaatagtcaaactgaa
ttattgaatgatgtagaagtggttttaatagatgaatatcaggatactaattacttacag
gagcagatttattttaaattggcaggtcgtgctacacgtaacggaggaaatatcaccgta
gttggcgatgatgatcaggctttatatagatttcgtggtgcaaatatagatttattcact
tcatatgcagatagaattgaaaagtcattaagcattgtaccgaaaaccatcttcctacaa
aagaattataggtccacatccaatataattgattttgtaaatgaattcatatccttggat
aacatatatcaaaaatcacgtactgcagataagccaccgataacggtaaatatagaaagc
tctgagaaattgcccgtattcggcatgtttagaaataacatcgaagagctatcaactgac
ttgtctaacctgatttatgaactcaaaacggataaaacaatatatctgcaaagaaatgga
aatgaatatgtaatcaatttaggtcaaaatccctcattagctctacttgctaattcaccg
aaggaaataaattcattcaacaaaaaaagactacccttttatatacgtgaaagtcttcaa
tataaggatgaaaatttggttgtattcaatccaagaggacaaaacattgaatccacggag
atagtgtcattgttttgtgggttattacttgtaaatatagattcaaactctttgatagaa
gaatcattagacaacatccctccccacaccaagaaaatattaagatcatggcgtaaacat
acaatggaatatatggaggaaagccaatcggaagtaataactacaaatgatgataaaata
aaccttgttgagttattaaacatggtaagtgaggaagtatcatttttaacggaacaatcc
aatgaaaacatgatttatcatgacataataagggatacgattatacaaaccaatgccgcc
ataaacactgatggatatattacaactgaccagatattctggcatatactggttccaata
gctaccggtgcaatacaagtcgacgatgacctctttgattttagtctggaggacaacgtc
aatatcatgtccatacatcaatccaagggactcgaatttgacgtggttatagttgatgtc
ggttccgacatatacaacaaccaatcaagctctgcatttaaaagatttccaaaggatggt
ggaatggcatataatcttgaaaaatacatcaacaatacaatggacttatcctacacaagc
aagctttccggcagggatgaagcgttcaatgacatgataaggcgttacttcgtcagttat
acgcgtgcaaaaaggctattgattctcgttggcttaagcagtatgaaagatggatataag
ggtgacttccaggacaatattaaaatacagaatgtggctaccggatggtcccgtgatgga
aaatggcattgggatggactggataatttaatacagctataa
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