Methanosphaera sp. BMS: AW729_07295
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Entry
AW729_07295 CDS
T05504
Name
(GenBank) phosphoesterase
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
metb
Methanosphaera sp. BMS
Pathway
metb03410
Base excision repair
metb03430
Mismatch repair
metb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
metb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AW729_07295
03430 Mismatch repair
AW729_07295
03440 Homologous recombination
AW729_07295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
metb03400
]
AW729_07295
DNA repair and recombination proteins [BR:
metb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
AW729_07295
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AW729_07295
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
AW729_07295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHHA1
DHH
DHH_CID
Baculo_PEP_C
Motif
Other DBs
NCBI-ProteinID:
AWX32916
LinkDB
All DBs
Position
2019355..2020722
Genome browser
AA seq
455 aa
AA seq
DB search
MIQKQQHSLLNRADDACDLIRSHIEKQHVVRIISHNDADGLTSAGILANAITKAGGRFHV
TILPRLRNSNVKELTKSRYKLFIFSDMGSGCLDSISKLKGDVVVADHHQVPDGGDYEIES
ENNTMIHVNPHIFNIDGTKDVSGSGLSYLSVHGFEYYELAGLALTGAYGDMQFKNGPTGI
NKLILDEAVEHDTMTVKDDLKLAYANSQNLQKSLCYTYTPVLNELSGDMDKCGEFLDNLN
IPRDKLLSQLSQDEYDKLKSELTNINEDIYGKVYHIPNIRKELSNIEEYSNLLNACGKNK
EYTAAISIELSKYNQMDYALRLLSDYANTMQKGIEWIKREGSVEKSHIQYIYTEDKQQKQ
VASAVSSIGIELGILPDKPILSLMKMDNLVKVSSRTTDNMVNKGVNLGQIMNQASNNFNG
SGGGHNIAAGATIPFDQMDNFINLVNEMVEYQIKQ
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgatccaaaaacagcagcactccttgttaaatagggctgatgatgcttgtgatcttata
agatcacatattgaaaaacagcacgttgtgagaattatctctcacaatgatgctgatgga
ctgacatctgccggaatactggctaatgccattacaaaggcaggtggtagattccatgtt
acgatattaccacgtcttagaaacagtaacgttaaggaacttactaagtcaaggtataaa
ttatttattttctcagatatgggtagtggatgcttagatagtatatcaaagttaaagggt
gatgttgtagtagcagatcatcatcaggttcctgatggtggtgactatgagatagaatcc
gagaataatactatgattcatgtaaatccgcatatttttaacatagatggaaccaaggat
gttagtggttcaggactatcctacttatcggtacatggctttgaatattatgaattagcc
ggtcttgcactaacaggtgcatatggtgatatgcaatttaagaatggtccaacaggtatt
aataaacttattttagatgaagccgtcgaacatgatacgatgactgttaaggatgacttg
aaattggcatatgctaatagtcagaatttacagaaatctctttgttatacatatacgcct
gttttaaatgaattatcaggtgatatggacaagtgtggtgaatttttagataatttgaat
attcctagggataaactgttaagtcaattatcacaggatgaatatgataaacttaagagt
gaattaaccaatatcaacgaggacatctatggcaaagtgtaccatattcccaacataagg
aaagaactatcaaatattgaagaatactctaatttattaaacgcttgcggtaagaacaag
gagtataccgctgccataagtattgaattgtccaagtataatcagatggattatgcactt
aggttactatccgattatgcaaataccatgcaaaagggtattgagtggattaagcgtgaa
ggaagtgttgaaaaaagtcatattcaatacatctacacagaggacaaacagcaaaagcag
gtggcaagtgccgttagcagcataggtattgaattgggtatactgccggataagcctatt
ctaagcttgatgaaaatggataatttagttaaagtttcatccagaactactgacaatatg
gtcaacaagggagttaatttaggtcaaataatgaaccaagcatcaaataactttaacggt
tcaggtggaggtcataacatagccgccggtgcaactataccatttgaccagatggataat
ttcattaacctggttaatgaaatggttgaatatcaaataaaacaataa
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