KEGG   Methanosphaera sp. BMS: AW729_07615
Entry
AW729_07615       CDS       T05504                                 
Name
(GenBank) signal recognition particle
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
metb  Methanosphaera sp. BMS
Pathway
metb02024  Quorum sensing
metb03060  Protein export
metb03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:metb00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    AW729_07615
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    AW729_07615
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    AW729_07615
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:metb02044]
    AW729_07615
Enzymes [BR:metb01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     AW729_07615
Secretion system [BR:metb02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   AW729_07615
  Eukaryotic Sec-SRP protein
   AW729_07615
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N CbiA cobW Zeta_toxin AAA_33 AAA_16 AAA_17 AAA_22 nSTAND3 6PF2K APS_kinase GTP_EFTU ResIII AAA_18 ATP_bind_1 SRPRB Thymidylate_kin MipZ MMR_HSR1 MeaB KTI12 NPHP3_N Peptidase_U57 AAA_19 AAA_31 MobB Glyco_transf_4 ParA G-alpha AAA_24 YqeC DUF1611 AAA_30 NTPase_1 LpxK SWI2_SNF2 DO-GTPase2 AAA_7 TrwB_AAD_bind NA-iREase1 NACHT nSTAND_NTPase7 AAA_28 Torsin Arf ArsA_ATPase
Other DBs
NCBI-ProteinID: AWX32972
UniProt: A0A2Z4L9U0
LinkDB
Position
complement(2111986..2113320)
AA seq 444 aa
MLEGLSDSLTKTMKKLAGMSVIDKKTLKEVNKDIQKALIQSDVNIKVVFALSKKIEKRAL
EEELPKGLSPKEHVMRIVYQELVNLIGEKPEKLEITHKPYIIMMLGLQGSGKTTTTAKLA
RHLKKKGYNSAIICTDTWRPAAYEQLRQLTEPMDVPVFGDPENKDAIDLAKKGLAECEDK
YDVILVDTAGRHKEEQDLLDEMSELSQVVEPDEVILVIDGTIGQQARSQAETFKHTTDIG
SIIVSKLDGSAKGGGALSAVAEIKAPIKFIGTGERVDDFEAFDPERFISRLLGMGDIETL
IEKAEEVTSAKSEQEMLDSIVSGKFTLKDMENQLTMMNKMGPVQQIMKLIPGIGNQLPAN
ASKITEEKLGMYKILMQSMTDYELENPEVIKKSRIQRISRGAGLTNDDVKDLLRYYSITK
KALKGMGKRNMGGPMGKLMRHMSR
NT seq 1335 nt   +upstreamnt  +downstreamnt
atgcttgaaggattaagtgacagtctaacaaaaacaatgaaaaaattagctggaatgtca
gtaattgataagaaaacactcaaagaagtaaataaggatattcaaaaagcactcatacaa
tcggatgtaaacattaaagttgtatttgcattatccaagaagatagaaaaaagagccctg
gaagaagaactgcctaaaggattaagtccaaaagaacatgtaatgcgtattgtataccaa
gaactagtaaatctaatcggtgaaaaaccagaaaaactagagattacgcacaaaccatac
attataatgatgctgggacttcagggtagtggtaaaacaaccaccacagccaagttagca
agacaccttaaaaagaaaggatataactctgcaataatatgtacagacacatggagacca
gccgcatatgaacagttaaggcaacttaccgaacctatggacgtacccgtattcggagac
ccggaaaacaaggacgctattgacttggctaagaaaggactggcagaatgtgaagacaaa
tatgacgtgatacttgtagatacagccggtcgtcataaagaggaacaggacttgcttgat
gaaatgagcgaattaagtcaggttgttgagcctgatgaggtaatacttgtaattgacggt
accatcggtcagcaagcacgtagccaagctgaaacattcaaacacacaacagacatagga
tccattatcgtaagtaaattagatggttcagcaaaaggtgggggtgcactatcagcggta
gctgaaattaaggcacctattaagttcataggtacaggtgaacgtgtagatgactttgaa
gcatttgaccctgaaagattcatatccagacttcttggtatgggtgatattgaaacatta
atagaaaaggccgaggaagtaacatcagccaaaagtgaacaggagatgcttgactccatt
gtaagcggtaagttcacccttaaggacatggaaaaccaacttacaatgatgaacaagatg
ggacccgttcagcagataatgaaacttattccgggtataggtaatcagttacctgcaaat
gcatccaagattaccgaagaaaaacttggaatgtacaagatattaatgcaatcaatgact
gattatgaactggaaaatcctgaagtaatcaagaaatcacgtattcaacgtataagtcgt
ggtgccggattaacaaacgatgacgtgaaggatttactcagatattactcaataaccaaa
aaagcactaaaaggaatgggaaaacgtaacatgggcggacctatgggtaaactcatgaga
catatgtcccgataa

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