KEGG   Methanosphaera sp. BMS: AW729_07635
Entry
AW729_07635       CDS       T05504                                 
Name
(GenBank) hypothetical protein
  KO
K07573  exosome complex component CSL4
Organism
metb  Methanosphaera sp. BMS
Pathway
metb03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:metb00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AW729_07635
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:metb03019]
    AW729_07635
Messenger RNA biogenesis [BR:metb03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     AW729_07635
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     AW729_07635
SSDB
Motif
Pfam: ECR1_N OB_RRP5_4th
Other DBs
NCBI-ProteinID: AWX32976
UniProt: A0A2Z4L9U3
LinkDB
Position
2116221..2116796
AA seq 191 aa
MNHKENEYVFPGEVLCAYEEYMPSDWTYVDDGYVKASIAGKISIDEKNKSIKIKADNAPR
SLKKNDLVIGYITEVKSSKALVTIKKIIGTDRDLITGYKGYIHISKATSDYIQTLHYLFK
IGDIIKARVANVYSNDYIELTTSNNDLGVIKAMCVNCRKFMKLDKKTHTLECECGHKDTR
KISVNYGGLKE
NT seq 576 nt   +upstreamnt  +downstreamnt
atgaatcataaagaaaatgaatatgtatttcccggagaggtcttatgtgcctatgaagag
tatatgccatctgactggacctatgtggatgatggttatgttaaagccagtatcgctgga
aaaatatccattgacgaaaagaacaagtcaataaaaataaaggcagataatgcacccagg
tcattgaaaaagaatgatttggtgataggttacataacagaagtcaaatcgtccaaggca
ttggtcaccattaaaaaaatcataggtaccgatagggacttgataactggatataagggt
tatatacatatttctaaggctacaagtgattatattcaaacattacattacctattcaag
ataggggatattataaaggcaagagttgcaaacgtatacagtaatgattatattgaatta
acaacatccaataatgatttgggtgtcattaaggcaatgtgtgtcaattgccgtaaattc
atgaaactggataagaaaacccatacactcgaatgtgaatgtggacataaggatacgcgt
aagatatcagtaaattatggaggattaaaagaatga

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