Methanosphaera sp. BMS: AW729_07635
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Entry
AW729_07635 CDS
T05504
Name
(GenBank) hypothetical protein
KO
K07573
exosome complex component CSL4
Organism
metb
Methanosphaera sp. BMS
Pathway
metb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
metb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AW729_07635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
metb03019
]
AW729_07635
Messenger RNA biogenesis [BR:
metb03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
AW729_07635
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
AW729_07635
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ECR1_N
OB_RRP5_4th
Motif
Other DBs
NCBI-ProteinID:
AWX32976
UniProt:
A0A2Z4L9U3
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Position
2116221..2116796
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AA seq
191 aa
AA seq
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MNHKENEYVFPGEVLCAYEEYMPSDWTYVDDGYVKASIAGKISIDEKNKSIKIKADNAPR
SLKKNDLVIGYITEVKSSKALVTIKKIIGTDRDLITGYKGYIHISKATSDYIQTLHYLFK
IGDIIKARVANVYSNDYIELTTSNNDLGVIKAMCVNCRKFMKLDKKTHTLECECGHKDTR
KISVNYGGLKE
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
atgaatcataaagaaaatgaatatgtatttcccggagaggtcttatgtgcctatgaagag
tatatgccatctgactggacctatgtggatgatggttatgttaaagccagtatcgctgga
aaaatatccattgacgaaaagaacaagtcaataaaaataaaggcagataatgcacccagg
tcattgaaaaagaatgatttggtgataggttacataacagaagtcaaatcgtccaaggca
ttggtcaccattaaaaaaatcataggtaccgatagggacttgataactggatataagggt
tatatacatatttctaaggctacaagtgattatattcaaacattacattacctattcaag
ataggggatattataaaggcaagagttgcaaacgtatacagtaatgattatattgaatta
acaacatccaataatgatttgggtgtcattaaggcaatgtgtgtcaattgccgtaaattc
atgaaactggataagaaaacccatacactcgaatgtgaatgtggacataaggatacgcgt
aagatatcagtaaattatggaggattaaaagaatga
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